PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 142aa MW: 16390.8 Da PI: 10.0234 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.6 | 6.1e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaev++iifs++gklye++s PON32793.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 75.6 | 1.4e-25 | 82 | 142 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + ++++s++qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K PON32793.1 82 QPVNDSQSSYQEYLKLKARVEVLQRSQRNLLGEDLGPLNSKELEQLENQLETSLRHIRSTK 142 4556789****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIIFSN RGKLYEFCSG 60 SSMLKTLEKY QKYSYGALEA SQPVNDSQSS YQEYLKLKAR VEVLQRSQRN LLGEDLGPLN 120 SKELEQLENQ LETSLRHIRS TK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 8e-77 | MIKC_MADS family protein |