PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21172.6 Da PI: 9.6815 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.1e-17 | 66 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ +g+Wv+eIr p+ k r +lg+f ta +Aa a+++a+++++g PON32675.1 66 NFRGVRQRT-WGKWVSEIRAPN---KGSRLWLGTFPTAIQAALAYDEAARAMYG 115 69****999.**********93...25************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MPRLEKTLSR RDGSQSVAET LAMWKEYNDS LDSSNGDGKP SGRVPAKGSK KGCMKGKGGP 60 ENSRCNFRGV RQRTWGKWVS EIRAPNKGSR LWLGTFPTAI QAALAYDEAA RAMYGSGARL 120 NFPNVAISSL QKDSASVATL SGSCSEASPA GSESSGTSNH SEVCAAEDAV KPLFTNVKKE 180 DVTHVTDHGK VYKEKGNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 2e-42 | ERF family protein |