PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON32468.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 371aa    MW: 41149 Da    PI: 8.967
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON32468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.4e-143983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       PON32468.1 39 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 83
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MASNSTNSIN NPQSTTPSDS DGSASAKKVR KPYTITKSRE SWTEEEHDKF LEALQLFDRD  60
WKKIEDFVGS KTVIQIRSHA QKYFQKVQKN GTLAHVPPPR PKRKAAHPYP QKASKTVLVP  120
LQASMAYPSS LNAMLPSYSR WDEASLLISP TSNKITTSQE EFPNLQATEG MHFFFLSFFC  180
VSCFIVSVLL VVVVVLSFVK GEFPALIMAY NLTDSADIAS RGVARNSNNN VSGIASSTRS  240
IPSSEIPKHG KQGSVLHGIP DFAEVYSFIG SVFDPETKGH VQKLKEMDPI NFETDWRLDF  300
PKYTSMHGAP LQILDITGVE VLLLMRNLSF NLCNPDFEPI KKVMSSYDIS AKTAGIATGT  360
LAKKQTYDLP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-105MYB_related family protein