PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 765aa MW: 84351.4 Da PI: 5.8057 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.2 | 2.2e-21 | 111 | 166 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k PON32251.1 111 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 166 7999************************************************9877 PP | |||||||
2 | START | 232.1 | 1.5e-72 | 282 | 503 | 3 | 206 |
HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT CS START 3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg 88 ++ ++el+k+a+a+ep+W +s+ e++n+de+l++f+ ++ +s+ea+r++gvv+ +l +lv++++d++ qW+e+++ ka+t++vis+g PON32251.1 282 VNQSMEELIKMATAGEPLWIRSVetgrEILNYDEYLKEFAVENPtkgpkRSIEASREVGVVFVDLSRLVQSFVDVN-QWKEMFPfmisKAATVDVISNG 379 57889**********************************88887999*****************************.********************** PP ......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS START 89 ......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180 ga+qlm+aelq+l+p+vp R+++fvRy++ql+a++w++vdvS+d +++ ++s+v+++++pSg++ie+ksngh+kvtwveh +++++++h + PON32251.1 380 egdnknGAVQLMFAELQMLTPMVPtREVYFVRYCKQLNAEQWAVVDVSIDKVEENI-DASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTM 477 ******************************************************98.9***************************************** PP HHHHHHHHHHHHHHHHHHHTXXXXXX CS START 181 lrslvksglaegaktwvatlqrqcek 206 +r +v+sgla+ga++w+atlq qce+ PON32251.1 478 YRTIVNSGLAFGARHWMATLQLQCER 503 ************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 765 aa Download sequence |
MGVDMSNTPP NSRTKDYFAS PALSLSLAGI FRDAGKAAAA AAAAVNTEVE EGDEGSSGGG 60 GGGGGSGRKD DTALEISSEN SGPARSRSDD DFEAEGEEDD GDGDKSKKKK RKKYHRHTAE 120 QIREMEALFK ESPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKSE 180 IDRLRDENKA LREQINKSCC PNCGTATVSK DPTITTEEQQ LRIENAKLKA EVEKLKATIR 240 KYPPGTASPS SSSVGNDQET RSSLEFYTGI FGLEKSRIME IVNQSMEELI KMATAGEPLW 300 IRSVETGREI LNYDEYLKEF AVENPTKGPK RSIEASREVG VVFVDLSRLV QSFVDVNQWK 360 EMFPFMISKA ATVDVISNGE GDNKNGAVQL MFAELQMLTP MVPTREVYFV RYCKQLNAEQ 420 WAVVDVSIDK VEENIDASLV KCRKRPSGCI IEDKSNGHCK VTWVEHLECQ KSTVHTMYRT 480 IVNSGLAFGA RHWMATLQLQ CERLVFFMAT NVPMKDSSGV ATLAGRKSIL KLAQRMTWSF 540 CRAIAASSYN TWTKVSSKTG EDIRIASRKN LNDPGEPLGV ILCAVSSVWL PVCPHVLFDF 600 LRDETHRNEW DIITSGGSVE STMANLAKGQ DRGNAVSIQT VNSKENSMWI LQDCCTNAYE 660 STVVYAPVDI AGMQSVMTGC DSSNLAVLPS GFSILPDGIE SRPLVITSRP EEKNSEGGSL 720 LTVAFQILTN SSPAAKLTME SVDSVNTLIS CTLKNIKTCL QCEEG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 112 | KKKKRK |
2 | 107 | 113 | KKKKRKK |
3 | 109 | 113 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |