PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32072.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 1617aa MW: 179668 Da PI: 6.8787

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.001	1588	1614	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H PON32072.1 1588 YKCKieGCGLSFRFVSDFSRHRRKtgH 1614 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1617 aa Download sequence
MGNVEIPKWL EGLPLAPVFR PTDTEFTDPI AYISKIEKEA GAFGICKIIP PLPKPSKKYV 60 FSNLNKSLLK CPELGSHGNS LNDRSSKLGS LDGSNDEEVR AVFTTRQQEL GQNVKKTKGA 120 VPNPPSGVHK QVWQSGEIYT LEQFESKSKT FAKSQLGMIK EVSPLVIEAV FWKASSEKPI 180 YVEYANDVPG SGFGEPEGQF RYFHRRRRKR NFYRRSRESS SRNKNDVATN GIDILRTDDV 240 KDASHMNSSD ISHSPTSVPL LPSNETSQSS KRKSQNSCHD MEGTAGWKLS NSPWNLQVIS 300 RSPGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNYLHTGS SKTWYAVPGD 360 YAFAFEEVVR SEAYGGNIDR LAALTLLGEK TTLVSPEVVV ASGIPCCRLI QNPGEFVVTF 420 PRAYHVGFSH GFNCGEAANF GTPLWLKVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS 480 RVPRSLLPGV RSSRLKDRQK EERELLVKKA FIEDILNENN ILSVLLGKDL NYHAVLWNPD 540 LLTYPSKETV SPSAGATIST TATENASCVD SGKRDNEQHY LLDDMSLYME NSNDLYLGSD 600 DLSCDFQVDS GTLACVACGI LGFPFMSVVQ PSEKASLELL CDNHLLVQEC PGVSGYLNSF 660 IAVDPGASNN GCITENLPPV SNSLSAMDLS VPSAIKFDHG QNTCNKFLRP RSFCLEHAVE 720 IVDMLQCKGG AKVLVICHSD YQKIKAHAAA IAEEIGSPFN YSEVPLDVAS KEDLNLIDLA 780 IDDDGHDECD KDWTSKLGIN LRHCVKIRKN SSSKQVQHAL TLGGLLSDKC SSSDSISLKW 840 QLRRSRTKKI YYPARIKPCH SAQLKKNGVV GETSLTHKKE KKLLQYSRRK FKTKPGGSTE 900 AGKVRGRHDT VGDLDELRRR VSENNVCNVG NSTSFKFSAL ERMSETQNEN HTPEATRDES 960 LKVSVGSVEN QIENHILEEI NMDGKAHHLA TLDGSETQDE PNVQTQKITN KLGEKQHPCP 1020 SSHITETCFK LRGDQDVEGK FNTTNEACNF VFEGHSNVEA QEGVLTDKNS DLTKMTTSQV 1080 VDPCNHNFGG QIENVAVEKV STSAKVCVSI HVDNEVALVV HATRVKDEKP VSYNCTVLED 1140 HNFASNGECS RDPRVICSTN DPRNGTALEV KPQEEIKTRM IECRPASVEE TSEAPCKTHT 1200 TEDFNNNICL GDQPQPEIKA VISEPIPVLL EETSEILSDL CAAAKLCCGL TSEETLQQKF 1260 GTSDGSSEEL ASSSVTQMEV HHYCVSVEEH SDVPRANSGQ DYLGTDVTSE NGLHQETLMT 1320 NGEQGSAPIL VTQTIDELTP VNAGEFELPK SPKGNLGDGF LSDNNKERKS EKDALPTVIS 1380 FQKYSRVKRE THATEDLCNG SEVCSSHDDR EMDNSKSNDV DTSSNPVKGR KRKREIDLLT 1440 ENKFSCNGFS RSPCEGLRPR TGKDAASCRN DILREIEGKP ATKVKKPSNV RVPPKDKKEN 1500 SRKSNKCDLE GCRMSFDTKA ELMLHKRNRC PHEGCGKRFS SHKYAMIHHR VHDDQRPLKC 1560 PWKGCSMSFK WAWARTEHIR VHTGERPYKC KIEGCGLSFR FVSDFSRHRR KTGHYVN

Sequence ? help Back to Top

Protein Sequence Length: 1617 aa Download sequence

MGNVEIPKWL EGLPLAPVFR PTDTEFTDPI AYISKIEKEA GAFGICKIIP PLPKPSKKYV  60
FSNLNKSLLK CPELGSHGNS LNDRSSKLGS LDGSNDEEVR AVFTTRQQEL GQNVKKTKGA  120
VPNPPSGVHK QVWQSGEIYT LEQFESKSKT FAKSQLGMIK EVSPLVIEAV FWKASSEKPI  180
YVEYANDVPG SGFGEPEGQF RYFHRRRRKR NFYRRSRESS SRNKNDVATN GIDILRTDDV  240
KDASHMNSSD ISHSPTSVPL LPSNETSQSS KRKSQNSCHD MEGTAGWKLS NSPWNLQVIS  300
RSPGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNYLHTGS SKTWYAVPGD  360
YAFAFEEVVR SEAYGGNIDR LAALTLLGEK TTLVSPEVVV ASGIPCCRLI QNPGEFVVTF  420
PRAYHVGFSH GFNCGEAANF GTPLWLKVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS  480
RVPRSLLPGV RSSRLKDRQK EERELLVKKA FIEDILNENN ILSVLLGKDL NYHAVLWNPD  540
LLTYPSKETV SPSAGATIST TATENASCVD SGKRDNEQHY LLDDMSLYME NSNDLYLGSD  600
DLSCDFQVDS GTLACVACGI LGFPFMSVVQ PSEKASLELL CDNHLLVQEC PGVSGYLNSF  660
IAVDPGASNN GCITENLPPV SNSLSAMDLS VPSAIKFDHG QNTCNKFLRP RSFCLEHAVE  720
IVDMLQCKGG AKVLVICHSD YQKIKAHAAA IAEEIGSPFN YSEVPLDVAS KEDLNLIDLA  780
IDDDGHDECD KDWTSKLGIN LRHCVKIRKN SSSKQVQHAL TLGGLLSDKC SSSDSISLKW  840
QLRRSRTKKI YYPARIKPCH SAQLKKNGVV GETSLTHKKE KKLLQYSRRK FKTKPGGSTE  900
AGKVRGRHDT VGDLDELRRR VSENNVCNVG NSTSFKFSAL ERMSETQNEN HTPEATRDES  960
LKVSVGSVEN QIENHILEEI NMDGKAHHLA TLDGSETQDE PNVQTQKITN KLGEKQHPCP  1020
SSHITETCFK LRGDQDVEGK FNTTNEACNF VFEGHSNVEA QEGVLTDKNS DLTKMTTSQV  1080
VDPCNHNFGG QIENVAVEKV STSAKVCVSI HVDNEVALVV HATRVKDEKP VSYNCTVLED  1140
HNFASNGECS RDPRVICSTN DPRNGTALEV KPQEEIKTRM IECRPASVEE TSEAPCKTHT  1200
TEDFNNNICL GDQPQPEIKA VISEPIPVLL EETSEILSDL CAAAKLCCGL TSEETLQQKF  1260
GTSDGSSEEL ASSSVTQMEV HHYCVSVEEH SDVPRANSGQ DYLGTDVTSE NGLHQETLMT  1320
NGEQGSAPIL VTQTIDELTP VNAGEFELPK SPKGNLGDGF LSDNNKERKS EKDALPTVIS  1380
FQKYSRVKRE THATEDLCNG SEVCSSHDDR EMDNSKSNDV DTSSNPVKGR KRKREIDLLT  1440
ENKFSCNGFS RSPCEGLRPR TGKDAASCRN DILREIEGKP ATKVKKPSNV RVPPKDKKEN  1500
SRKSNKCDLE GCRMSFDTKA ELMLHKRNRC PHEGCGKRFS SHKYAMIHHR VHDDQRPLKC  1560
PWKGCSMSFK WAWARTEHIR VHTGERPYKC KIEGCGLSFR FVSDFSRHRR KTGHYVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein