PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON31695.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 375aa MW: 42588 Da PI: 6.8862

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON31695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.8e-05	208	227	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PON31695.1 208 FSCPLCFKTFNRYNNMQMHM 227 89*****************9 PP
2	zf-C2H2	14.4	0.00011	292	314	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PON31695.1 292 FMCRKCGKAFAVRGDWRTHEKNC 314 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MSTDPYSNYL NGWLNLNPVH HHHFSSNSSN NPYFPSSYYD YNTTNICFNN NINIENTSLP 60 SSPPSPPLKE ALPLLSLGPT RSYHDDQDHN HLESSSILSH HHDDEHMKNK EKSEESSLFL 120 SSATSHDHDE TVTVALHLGI PSPSTTSSAD LISRLSSTEI YDKDRQEEED HVSSVMSSGF 180 HSDRSSILNK GQYWIPTPAQ ILIGPTQFSC PLCFKTFNRY NNMQMHMWGH GSQYRKGPES 240 LRGTQPTAML RLPCFCCAPG CRNNIEHPRS RPLKDFRTLQ THYKRKHGIK PFMCRKCGKA 300 FAVRGDWRTH EKNCGKLWYC TCGSDFKHKR SLKDHIKAFG NGHAPYGVDC FDQEDDEGEG 360 ASEVSTEQDN NNDFS

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MSTDPYSNYL NGWLNLNPVH HHHFSSNSSN NPYFPSSYYD YNTTNICFNN NINIENTSLP  60
SSPPSPPLKE ALPLLSLGPT RSYHDDQDHN HLESSSILSH HHDDEHMKNK EKSEESSLFL  120
SSATSHDHDE TVTVALHLGI PSPSTTSSAD LISRLSSTEI YDKDRQEEED HVSSVMSSGF  180
HSDRSSILNK GQYWIPTPAQ ILIGPTQFSC PLCFKTFNRY NNMQMHMWGH GSQYRKGPES  240
LRGTQPTAML RLPCFCCAPG CRNNIEHPRS RPLKDFRTLQ THYKRKHGIK PFMCRKCGKA  300
FAVRGDWRTH EKNCGKLWYC TCGSDFKHKR SLKDHIKAFG NGHAPYGVDC FDQEDDEGEG  360
ASEVSTEQDN NNDFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-127	C2H2 family protein