PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON31523.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 433aa MW: 47267.9 Da PI: 9.3109

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON31523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.9e-17	73	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g PON31523.1 73 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 132 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MASSSSDPGL KPESSGGGGG GGAGGGGESS EAVIANDQLL MYRGLKKAKK ERGCTAKERI 60 SKMPPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDDEEAAA 120 RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQNVSREEYL ASLRRKSSGF SRGISKYRGL 180 SSRWEPSFGR MAGSEYFNSI NYGTGDDPAT ESEFVGSICF ERKIDLTNYI KWWGPSKNRQ 240 GEASVKSSEE TKHACAGDIG GELKTIEWAV PPTEPYQMPR LGMSHEGIQH KSSKVSALSI 300 LSRSAAYKSL QEKASKKQES NAENDANKSK NAINKMDYGK AVEKPTSHDG GSERYGVALG 360 MSGGLSLQRN ISMFPLTPLL SAPLLTNYNT IDPLVDPIVW TSLAPVLPSG ISRTAEVTKT 420 ETSSTFTLYQ PGE

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MASSSSDPGL KPESSGGGGG GGAGGGGESS EAVIANDQLL MYRGLKKAKK ERGCTAKERI  60
SKMPPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDDEEAAA  120
RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQNVSREEYL ASLRRKSSGF SRGISKYRGL  180
SSRWEPSFGR MAGSEYFNSI NYGTGDDPAT ESEFVGSICF ERKIDLTNYI KWWGPSKNRQ  240
GEASVKSSEE TKHACAGDIG GELKTIEWAV PPTEPYQMPR LGMSHEGIQH KSSKVSALSI  300
LSRSAAYKSL QEKASKKQES NAENDANKSK NAINKMDYGK AVEKPTSHDG GSERYGVALG  360
MSGGLSLQRN ISMFPLTPLL SAPLLTNYNT IDPLVDPIVW TSLAPVLPSG ISRTAEVTKT  420
ETSSTFTLYQ PGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-164	AP2 family protein