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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | ONIVA12G17390.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family | NAC | ||||||||
| Protein Properties | Length: 333aa MW: 36371.3 Da PI: 8.9766 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 168.8 | 1.8e-52 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhP+d+el+++yL++kv++k ++ + + +vd++kvePwdLp+ ++ + kewyfFs rd+kyatg+r+nrat sgyWkatgkd+ v
ONIVA12G17390.1 14 LPPGFRFHPRDDELICDYLAPKVASKVgFSGRRPpMVDVDLNKVEPWDLPEVASVGGKEWYFFSLRDRKYATGQRTNRATVSGYWKATGKDRVV 107
79**********************99986665656***************8888899***********************************99 PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +g+lvg++ktLvfy+grapkg+kt+Wvmheyr+
ONIVA12G17390.1 108 AR-RGALVGMRKTLVFYQGRAPKGRKTEWVMHEYRM 142
99.999****************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 333 aa Download sequence |
MSMMSFLSMV EAELPPGFRF HPRDDELICD YLAPKVASKV GFSGRRPPMV DVDLNKVEPW 60 DLPEVASVGG KEWYFFSLRD RKYATGQRTN RATVSGYWKA TGKDRVVARR GALVGMRKTL 120 VFYQGRAPKG RKTEWVMHEY RMEGVHDQQA SSFSSKEDWV LCRVICKRKS GGGATSKSRS 180 LTTTTTTIVH DTSTPTSSPP LPPLMDTTLA QLQASMNTSS SSAIAAVAAL EQVPCFSSFS 240 NSIASNNNNS NSATVNAQQC YLPIVTGSNN NGMSYLDHGL PEFGSFLDTQ SCDKKMLKAV 300 LSQLNSIGGE VLPGLPPPSE MAAAVSSSWM NHF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G56010.2 | 8e-80 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | ONIVA12G17390.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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