PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G16900.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 323aa    MW: 34271 Da    PI: 4.2702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G16900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.5e-15157207255
              AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      g+ GV+++   grW AeIrd    + ++  rf++g+f+ta +Aa a++a  ++l+g
  ONIVA12G16900.1 157 GFLGVHQRT-YGRWSAEIRD----NvIKgSRFWIGTFDTALDAALAYDAVSRRLYG 207
                      788***999.8*********....66345********************9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MCGGGPDNHR AIAVAAAAEL PPPSVVAVEM APPHGHLPGK EVYNEEEEEE DDDDDDEYDG  60
REFEEEFLRF SMMVDEEDDD DDDDEVEIIA VVPPPRWPLV GARGTTSAVE SVTNLQARTS  120
PLPNPVVPQT GTKASKRGDS GAKAKPAAAK KRRSKHGFLG VHQRTYGRWS AEIRDNVIKG  180
SRFWIGTFDT ALDAALAYDA VSRRLYGLNA KTNFPAAAGE DDLPPPPPPA KPCSSTKRPK  240
KCNTSGDLGA AAAPPQAVDT PAAAAAGVEL TSLLCSVAAQ AQEVSDGWEF IQELLLLGGG  300
VSPLDYLNGQ ELAGAAVGDL WSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155KKRRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-09ERF family protein