PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G16860.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 297aa MW: 31879.2 Da PI: 5.4719

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G16860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.4	1.2e-16	115	170	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr+rr+ +NRe+ArrsR+RK+a + Le v +L +eN +L+k+l+ +++++++ ONIVA12G16860.2 115 AKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKRLSDMTQKYKQS 170 69*****************************************7777777776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKRGGAGVGG GGGGGDPGAY AAVLKTKLDL YCAAVAKSME AKLQESSLGY LNLQASDTSQ 60 LVSQDSFNGY GSTRVTNSNA IHEDDDQGKP ANSGTSKEQS DDDGDLEEDT DPVNAKRTRR 120 MLSNRESARR SRKRKQAHLN DLESQVSQLR SENASLQKRL SDMTQKYKQS TTEYGNLQDD 180 MNAMRRKVNI AEEAVRRVTG IGLQLFTTSE MPASSMPFSS GVSDAASAAL VEDDWTNCSL 240 PDEAIPVPSA AMALRSPSVR RVASLENLQK RIHAGDVTHF EAASALSLPE ATACDNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	135	RRSRKRK
2	129	136	RRSRKRKQ
3	131	136	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-24	bZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G16860.2