PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G16560.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 504aa MW: 53197.8 Da PI: 10.2112

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G16560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.6e-31	438	495	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ ONIVA12G16560.1 438 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGEHNHT 495 9***********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MAARTRHTQF RPYSRGRAVK AHLHIEDSIS LTLVLDTVDP HGERFPSRPS SQSNAPGSST 60 SPYFPTRVAS SPTPLSSSSS SPLLPASSTP LPTPIPSSPR SRWPDPSGDD DEPLAGTAPC 120 SELRESEASL AGLAPAAAAA AAMEEEVEAA NRAAVESCHR VLALLSQQQD PALLRSIASE 180 TGEACAKFRK VVSLLGNGGG GGGGGGGGHA RGRMAGRSRP SAVLREKGFL ESSSGGGQLG 240 MMMSGAATPS TSSAVHLRNR IGGGSGVPPD SLRGLDLVSS SSKGGAHQFD PPKLVQPLSV 300 QFQFGATAHR YPFQQHQHQQ KLQAEMFKRS NSGISLKFDS PSATGTMSSA FMSSLSMDGS 360 VASLEGKPPF HLISGPVASD PVNAHHAPKR RCTGRGEDGS GKCATTGRCH CSKRRKLRIK 420 RSIKVPAISN KIADIPPDEY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERCVDD 480 PAMLIVTYEG EHNHTRLPTQ SAQT

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MAARTRHTQF RPYSRGRAVK AHLHIEDSIS LTLVLDTVDP HGERFPSRPS SQSNAPGSST  60
SPYFPTRVAS SPTPLSSSSS SPLLPASSTP LPTPIPSSPR SRWPDPSGDD DEPLAGTAPC  120
SELRESEASL AGLAPAAAAA AAMEEEVEAA NRAAVESCHR VLALLSQQQD PALLRSIASE  180
TGEACAKFRK VVSLLGNGGG GGGGGGGGHA RGRMAGRSRP SAVLREKGFL ESSSGGGQLG  240
MMMSGAATPS TSSAVHLRNR IGGGSGVPPD SLRGLDLVSS SSKGGAHQFD PPKLVQPLSV  300
QFQFGATAHR YPFQQHQHQQ KLQAEMFKRS NSGISLKFDS PSATGTMSSA FMSSLSMDGS  360
VASLEGKPPF HLISGPVASD PVNAHHAPKR RCTGRGEDGS GKCATTGRCH CSKRRKLRIK  420
RSIKVPAISN KIADIPPDEY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERCVDD  480
PAMLIVTYEG EHNHTRLPTQ SAQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	4e-71	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G16560.1