PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA12G15590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 127aa MW: 12573.1 Da PI: 6.2337 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.2 | 0.00054 | 35 | 54 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ Cgk F++ L H ONIVA12G15590.1 35 HECNVCGKAFPTGQALGGHK 54 79*********988887665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MVDDDEVVVE TKPAAIATPS SSASGVSGGG GGRAHECNVC GKAFPTGQAL GGHKRCHYDG 60 TIGSAAGAGA SKPAAKTTVA VAASRGFDLN LPALPDVAAA ADQRCAAEDD EVLSPLAFKK 120 PRLMIPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43170.1 | 5e-12 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA12G15590.1 |