PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G15550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 402aa    MW: 42448.3 Da    PI: 4.6106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G15550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1970119255
              AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  ONIVA12G15550.1  70 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 119
                      789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MAFHLQPHSL TQAKLAIDRS SSMPPSMATA RVASPSTDRK RKASSEDDID AAAAAAALTS  60
PLAPARGRKR FVGVRQRPSG RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA  120
NTRTNFWPRP SPPPAAVAPP ETTTTPALPS KVTNLLLLRL KARNQQLVDA GAAAPQEAAL  180
LQLQQQTPAS CQEVFVRSHG EEYGFHVDDF LSDACSNEQY SGDSSLGLDD DDGEVEDEEE  240
EELDFQFMDV APGASSAAAE AGLGGEGALC SPFEMVAAEL GGAVDVTAHD AMRQMDYERK  300
ISASLYAFTG VSECLRIRAA AGATAAARDH LTGLREACRK KQKFAAAAAA PPQQQEPSPP  360
PQQPETPASS GGGMSETASG GGGDGDVLMW SSLDLAPICH MA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-22ERF family protein