PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G15170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 353aa    MW: 38305 Da    PI: 4.2811
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G15170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.3e-05221423
                     TTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  4 pdCgksFsrksnLkrHirtH 23
                     p Cgk F+r+ nL +H  t+
  ONIVA12G15170.1  2 PVCGKNFKRRGNLLNHELTC 21
                     58**************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MPVCGKNFKR RGNLLNHELT CKYISDVHPQ TESSGDAQAR KDILGFHIPR QKRTVPTFPA  60
SDYAQGGING ATTSEAKVDR DPEEETDVLE ALLLLREQPA YPGEETFSDG EPGAGNVDDE  120
PAASNPDKVL TMCSDKCSSS PVECYGGDER RVGARAIAGV EEDDLNPNVG CRGVTDCVDE  180
SDVIQKQKRK PDLSVADLRD LVEMKQQNMK ADTNIHDQGH PSVMQMQKNE LGLDLLPHKN  240
SSDHEVPTLS VSSMDDPDGL VSTDTNSDKE TETVNVGIDI NIPEQRESSV TRMQNEKLGL  300
NLLPRNDGSG HEVPILSVSS TDDLNSLIPT DTSSDKDTNS NVADSLGHCP AQE