PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G14900.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 738aa    MW: 81304.9 Da    PI: 4.9526
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G14900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.62.2e-1103587301374
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l++lL++cA+av+++d + a++lL++++++a p+gd++qRla++f+e+L+ar+a+++s + ++l +++ts    ++ l+a++l+  +  + k+s
  ONIVA12G14900.1 358 LRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARIAGTGSLVHQSLVAKRTS---AVDILQAYQLYMAAICFKKVS 448
                      6789***************************************************999999999999998...9******************** PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                      ++  Nq+I++a  g++++Hi+D++i++G+QWp++l+ +++R++gpp++R+Tg++ p++g   +e++eetg+rL+k+A+e+gvpf++n+++a ++
  ONIVA12G14900.1 449 FIFSNQTIYNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVRMTGIDLPQPGfrPTERIEETGHRLSKYAQEFGVPFKYNAIAAVKM 542
                      **********************************************************9*****************************9999** PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      e+++ e+L+++p+E+l+Vn+++q ++l+desv ++s+rd vL+ +++++P+v++++  + + +++ F++rf eal +ysalfd l+a+ prese
  ONIVA12G14900.1 543 ESVRKEDLNIDPDEVLIVNCQYQFKNLMDESVVIDSPRDIVLSNIRKMQPHVFIHAIVNGSFSAPFFVTRFREALFFYSALFDVLDATTPRESE 636
                      ********************************************************************************************** PP

             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +r  +E+ ++gr++ nv+aceg +r+er et+++W+ r ++aGFk++pl+ ++++ ++  ++ ++ + + ++ ++++l++gWk+r L+++S W+
  ONIVA12G14900.1 637 QRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGFKQLPLNPEIVQVVRNKVKDCYHKDFVIDIDHQWLLQGWKGRILYAISTWT 730
                      *****************************************************************889*************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MGSSAADSFP AGGDDAIRDV YGIGGGGEED DPSLFLYLSD LAPVSPSAYL DLPPSPPPPT  60
TTATTMVKEG EEAPEDLVLP FISRMLMEED IDDKFFYDYP DNPALLQAQQ PFLEILSDPS  120
SNSRSSNSDD PRLSPTSSSD TSAAINSYDA AATATAVAAA AVPVPQYESI ELDPAAFFAA  180
ANSDLMSSAF LKGMEEANKF LPTENKLVID LEASSENNYL RGLEEAKRFL PSDDKLQVGF  240
AAAAAPVVSV KKEAVDVVVA TASGGGGRGR KNPYDDEELE LEGGRSSKQT AVQGDDVAAR  300
AMFDKVMMPS HENCTEMMEK LRIAMKEEAA KNEASAGGKG GNGKVKGGRR GGRDVVDLRT  360
LLIHCAQAVA TDDRRSATEL LKQIKQHAKP TGDATQRLAH CFAEGLQARI AGTGSLVHQS  420
LVAKRTSAVD ILQAYQLYMA AICFKKVSFI FSNQTIYNAS LGKKKIHIVD YGIQYGFQWP  480
CFLRRISQRE GGPPEVRMTG IDLPQPGFRP TERIEETGHR LSKYAQEFGV PFKYNAIAAV  540
KMESVRKEDL NIDPDEVLIV NCQYQFKNLM DESVVIDSPR DIVLSNIRKM QPHVFIHAIV  600
NGSFSAPFFV TRFREALFFY SALFDVLDAT TPRESEQRLL IEQNIFGRAA LNVIACEGID  660
RVERPETYKQ WQVRNQRAGF KQLPLNPEIV QVVRNKVKDC YHKDFVIDID HQWLLQGWKG  720
RILYAISTWT PNDALSYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-165GRAS family protein