PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G13670.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 539aa MW: 57704.1 Da PI: 7.4023

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G13670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.4	1.1e-31	269	325	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgs++prsYY+Ct+++Cpvkkkve+++ d+++ ei+Y+g+Hnh+ ONIVA12G13670.1 269 DDGYNWRKYGQKVVKGSDCPRSYYKCTHPNCPVKKKVEHAE-DGQISEIIYKGKHNHQ 325 8************************************99.*************8 PP
2	WRKY	107	9.7e-34	425	483	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k++er+++dpk+v++tYeg+Hnhe ONIVA12G13670.1 425 LDDGYRWRKYGQKVVKGNPHPRSYYKCTYAGCNVRKHIERASSDPKAVITTYEGKHNHE 483 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MSARPPPPPR PRLALPPRSA AESLFTGAGD ASPGPLTLAS ALFPSDPDGG GGGGVMTSSS 60 SSAAGATSFT QLLIGNLSAP PPPPPPQQQQ QQREAARGGG VARAGPALSV APPPAAGSVF 120 TVPPGLSPSG LLDSPGLLFS PAMFDAFDVL DMFIPDKILP KRATRIKLDI YFVKTSPEGG 180 FGMSHREALA QVTAQASHSP LRMFDHTEQP SFSAAPTSSE AMQHMNAAVN MTGISDMVMG 240 PTNNENVAFQ PAEASQRYQV NAPVDKPADD GYNWRKYGQK VVKGSDCPRS YYKCTHPNCP 300 VKKKVEHAED GQISEIIYKG KHNHQRPPNK RAKDGSSSAA DQNEQSNDTV SGLSGIKRDQ 360 EAIYGMSEQL SGLSEGDDMD DGESRPHEAD DKESDSKKRN IQISSQRTSA EAKIIVQTTS 420 EVDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTYAGCNVRK HIERASSDPK AVITTYEGKH 480 NHEPPVGRGN NQNAGNAAPS SSAQQNMQNL SSNQASLTMA DFNNINQRPI GVLQFKSEE

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MSARPPPPPR PRLALPPRSA AESLFTGAGD ASPGPLTLAS ALFPSDPDGG GGGGVMTSSS  60
SSAAGATSFT QLLIGNLSAP PPPPPPQQQQ QQREAARGGG VARAGPALSV APPPAAGSVF  120
TVPPGLSPSG LLDSPGLLFS PAMFDAFDVL DMFIPDKILP KRATRIKLDI YFVKTSPEGG  180
FGMSHREALA QVTAQASHSP LRMFDHTEQP SFSAAPTSSE AMQHMNAAVN MTGISDMVMG  240
PTNNENVAFQ PAEASQRYQV NAPVDKPADD GYNWRKYGQK VVKGSDCPRS YYKCTHPNCP  300
VKKKVEHAED GQISEIIYKG KHNHQRPPNK RAKDGSSSAA DQNEQSNDTV SGLSGIKRDQ  360
EAIYGMSEQL SGLSEGDDMD DGESRPHEAD DKESDSKKRN IQISSQRTSA EAKIIVQTTS  420
EVDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTYAGCNVRK HIERASSDPK AVITTYEGKH  480
NHEPPVGRGN NQNAGNAAPS SSAQQNMQNL SSNQASLTMA DFNNINQRPI GVLQFKSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-105	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G13670.1