PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA12G08480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 80aa MW: 9653.37 Da PI: 9.9778 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.9 | 4.5e-05 | 54 | 79 | 20 | 45 |
HHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVk 45 ++ +yps+ e+ LAk++gL+ +q+ ONIVA12G08480.1 54 YRWPYPSEMEKIALAKSMGLEPKQIN 79 4679********************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 80 aa Download sequence |
MLLPLWMLLY HHHRGDEDEA YFIGSMAELS KKRKKGKLLK EARQKLLTWW ELHYRWPYPS 60 EMEKIALAKS MGLEPKQINN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 31 | 35 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G08150.1 | 6e-19 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA12G08480.1 |