PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA12G01900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 82aa MW: 8871.05 Da PI: 8.2081 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 41.5 | 2.1e-13 | 1 | 56 | 319 | 374 |
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +e+aGF+ vpls+ a + + ++r+++ + + e g+l+l+W++rpL+s+SaWr ONIVA12G01900.1 1 MEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENRECGGCLLLCWSSRPLYSISAWR 56 89*************************887888899*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
MEMAGFTGVP LSYAAIRKGN DMVRRCGLRR CENRECGGCL LLCWSSRPLY SISAWRPAAS 60 GGAGSGSERS EYIHVGAEAD DR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-13 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA12G01900.1 |