PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA12G00200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 482aa MW: 53302.2 Da PI: 7.2889 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.5e-31 | 321 | 377 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 Dgy+WrKYGqK+vkgsefprsYY+Ct+++Cpvk+kve + d+++ ei+Y+geHnh+k ONIVA12G00200.1 321 DGYSWRKYGQKQVKGSEFPRSYYKCTHPTCPVKRKVEMTP-DGRIAEIVYNGEHNHPK 377 9***************************************.***************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MAHGGGEEEE ERVLSHGDVV LLRCDLTILR GPHFLNDRII AFYLAHLAAD HDADDDLLLL 60 PPSIPYLLSN LPDPASVAAV ADPLRLASRR LVLLPVNDNP DVSHAEGGSH WTLLVLDNSN 120 AVSGPRFVHH DSLPPTNLPF ARRLAAVLRP LLPASAIPLI EGPTPRQTNG YDCGVFVLAV 180 ARAICNWWLT RARHSDSDSD WLEAVKREPF NSTSFSPFDC IYQSLPVTAQ DFGTWCDMQS 240 HKKVAAVKPV ASRPSSRLRS FSMLQEDSTA IDSPRLEDSG THTTYDQKKA DRGKGACWDN 300 LTVSQSVRKP NVSAKNSLSY DGYSWRKYGQ KQVKGSEFPR SYYKCTHPTC PVKRKVEMTP 360 DGRIAEIVYN GEHNHPKPHP PRKPTLSTSV ETLVATNDAG LENKLEGCDQ AIGSDAVVEA 420 LRGGCHCLDG FRNGNEISDC KKRLFRFGVR FHDGSCKRIL AQPHNIINLG SHLVAEYVQE 480 KQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 1e-24 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA12G00200.1 |