PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G23200.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 642aa    MW: 72141.6 Da    PI: 6.6506
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G23200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.22.7e-1062646382373
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lLl+cA+av+++d + a++lL ++++++s  gd+ qRla++f+++L+arla+++s++y++l +++ts   +++ l+a++l+ e++ + k+++
  ONIVA11G23200.1 264 HNLLLHCAQAVATDDRRSAHELLRQIKQHSSAWGDAGQRLAHCFAQGLEARLAGTGSQVYQSLMSQRTS---VVDFLKAYRLYMEACCCKKVAF 354
                      689************************************************************999999...********************** PP

             GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                      +  N++I++av+g +++Hi+D+++s+G+QWp Ll++La+R++gpp++RiTg++ p++g    + +eetg+rL+++A+elgvpf+f+ ++a++ e
  ONIVA11G23200.1 355 VFSNKTIYDAVAGRRKLHIVDYGLSYGFQWPGLLRELAARRGGPPEVRITGIDLPQPGfrPDQHIEETGRRLSRYADELGVPFKFHGIAATKKE 448
                      *********************************************************9*99***************************999*** PP

             GRAS 188 dleleeLrvkp.gEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                      +++ eeL   + +E+++V +  +  +++des++ +s   +rdevL  +++++P+v+++   +  ++++ Fl+rf eal+yy+a fd l+a+++r
  ONIVA11G23200.1 449 SVRREELGEAEeDEVVVVISLCHFRNVMDESLQEDSsrsPRDEVLGNIRRMRPDVFIHGIMNGAYGATYFLTRFREALYYYAAQFDLLDATVGR 542
                      *******77766******************9988777779****************************************************** PP

             GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                      es+er+ vEr ++gr++ nv+acegaer+er e +++W++r ++aG++++pl+ +++  +   +r  + + + v+e++ +l+  Wk+r L+++S
  ONIVA11G23200.1 543 ESHERMLVERDIFGRAALNVIACEGAERVERPEMYKQWQARNQRAGLRQLPLNPQVVRLVLDKVRDKYHKDFVVDEDQRWLLHRWKGRVLYALS 636
                      **************************************************************999999888*********************** PP

             GRAS 372 aW 373
                       W
  ONIVA11G23200.1 637 TW 638
                      ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    
MATTPEAEES LRFRWPAAEE EFDNDMVLPY ISRLLMEDDV HDHFFYQYPD HPALLRAQQP  60
FAQILASSPS SAAGASSSSS SSDAPPSRPF FDDEAATAKT FPTAAVHSVD HQYSGGLDMV  120
NMAFLKGMEE ANKFLPTNTL LLSTDSSTTL QLQVQGEVVV DGHGMLGGVG GAAAAHAHGA  180
INSKKVNCRD DDLEAGTGRA TKLMAPEPEL EEEGARQMFD EMMLQEHEIC MKGVKQLSLK  240
SKSSSSKKAR GRRTVIHTEP VDLHNLLLHC AQAVATDDRR SAHELLRQIK QHSSAWGDAG  300
QRLAHCFAQG LEARLAGTGS QVYQSLMSQR TSVVDFLKAY RLYMEACCCK KVAFVFSNKT  360
IYDAVAGRRK LHIVDYGLSY GFQWPGLLRE LAARRGGPPE VRITGIDLPQ PGFRPDQHIE  420
ETGRRLSRYA DELGVPFKFH GIAATKKESV RREELGEAEE DEVVVVISLC HFRNVMDESL  480
QEDSSRSPRD EVLGNIRRMR PDVFIHGIMN GAYGATYFLT RFREALYYYA AQFDLLDATV  540
GRESHERMLV ERDIFGRAAL NVIACEGAER VERPEMYKQW QARNQRAGLR QLPLNPQVVR  600
LVLDKVRDKY HKDFVVDEDQ RWLLHRWKGR VLYALSTWVA QH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-134GRAS family protein