PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G23180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 532aa MW: 59066.2 Da PI: 4.5588 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 47.7 | 2.8e-15 | 304 | 361 | 2 | 59 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvse 59 +lL++cA+av+++d + a++lL+++++++s +gd++qRla +f+e+L+arla+++s+ ONIVA11G23180.1 304 HTLLIHCAQAVATSDRRSATELLKQIKQNSSARGDATQRLACCFAEGLEARLAGTGSQ 361 679**************************************************96655 PP | |||||||
2 | GRAS | 127.2 | 1.8e-39 | 367 | 522 | 218 | 373 |
GRAS 218 vsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhet 311 v+++s+rd vL+ +++++P+v+v + + ++++ Fl+rf e+l +ys+ fd+l+a++pr+++er +Er +lgr + nv+acega+r+ r et ONIVA11G23180.1 367 VDSPSPRDMVLNNIRDMRPHVFVQCVVNGAYGAPFFLTRFRETLFFYSSQFDMLDATIPRDNDERLLIERDILGRCALNVIACEGADRVDRPET 460 456679**************************************************************************************** PP GRAS 312 lekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +++W r ++aG++++pl+ ++++ ++ ++k + + + ++ ++++l++gWk+r L+++S W ONIVA11G23180.1 461 YKQWLVRNHRAGLTQLPLQPQVVELVRDKVKKLYHKDFVIDVDHNWLLQGWKGRILYAMSTW 522 **********************************888************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 532 aa Download sequence |
MAAAAPQLEE LVDLEPFSPS LFLDLPPTPH SDDPNDDDLI LPFISRMLME DDIDDKFFYQ 60 FPDHPALLHA QQPYAQILDA PSDDTTTNSS DDSASATTNN TTNSAAAANA SWPYDPIELS 120 QLLQSPPHPV SDNHDADVGD TRSAPEDDKD LKLLFSGADN MEMLNMAFLK GREEATKFLP 180 TNNTLFAGFD GASLLKTEPA VDEPTLMFGR SGGSGRGRKN RHGEEDDLEA ETGRSSKLMV 240 PPQEDTAAAS EMFDEIMFNG YEVIMKGMEE LRVAMDSEAE KKARNGGGAG RRAARAKAAV 300 VDLHTLLIHC AQAVATSDRR SATELLKQIK QNSSARGDAT QRLACCFAEG LEARLAGTGS 360 QDESVVVDSP SPRDMVLNNI RDMRPHVFVQ CVVNGAYGAP FFLTRFRETL FFYSSQFDML 420 DATIPRDNDE RLLIERDILG RCALNVIACE GADRVDRPET YKQWLVRNHR AGLTQLPLQP 480 QVVELVRDKV KKLYHKDFVI DVDHNWLLQG WKGRILYAMS TWVADRDHKS LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29065.1 | 4e-54 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G23180.1 |