PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G20620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 28832.2 Da PI: 4.9995 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.9e-11 | 183 | 223 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rRR+riN+++ L++l+P+ +K++ +++Le+Av+Y+k Lq ONIVA11G20620.1 183 KRRRERINERLRILQQLVPNG-----TKVDISTMLEEAVQYVKFLQ 223 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MDARCANIWS SADARSEESE MIDQLKSMFW SSTDAEINFY SPDSSVNSCV TTSTMPSSLF 60 LPLMDDEGFG TVQLMVSTGM DMCSDHQHQV ITGNKRMFPM DEHFEQQQKK PKKKTRTSRS 120 VSSSSTITDY ETSSELVNPS CSSGSSVGED SIAATDGSVV LKQSGNSRGH KQCSKDTQSL 180 YAKRRRERIN ERLRILQQLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS SDDTWMFAPL 240 AYNGMNMDLG HTLAENQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27740.1 | 1e-32 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G20620.1 |