PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G16880.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GeBP
Protein Properties Length: 389aa    MW: 41295.1 Da    PI: 4.8784
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G16880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57392.35.5e-2971173296
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqk 87 
                      lfqrlw++e e+++L+G++df+a++g+   +++ d+  fy+ +++++sf+++ksqlveK+rrLKkK++ + ++      +    ++f+++h+  
  ONIVA11G16880.1  71 LFQRLWTDEEELLILRGFLDFTARRGTtfASHQyDTGPFYDEIRRRLSFDFTKSQLVEKLRRLKKKYRLCAARmasspHAAAAGFAFRTPHEGA 164
                      79************************99877778***********************************99996666556677889******** PP

           DUF573  88 ifelskkiW 96 
                      i++l++ iW
  ONIVA11G16880.1 165 IYDLARHIW 173
                      ********* PP

Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MAADELAASA SHSSSSSPAD EDDEEGTDSD GSNPDHAAAP HAPPEPTAAI PPPPPPPPPQ  60
PGPGAEDSRR LFQRLWTDEE ELLILRGFLD FTARRGTTFA SHQYDTGPFY DEIRRRLSFD  120
FTKSQLVEKL RRLKKKYRLC AARMASSPHA AAAGFAFRTP HEGAIYDLAR HIWPPALKRD  180
GTASDDDDIN PAAAAAAAAA VTTPVAMEDG FGGSAPTPTP TPRGRGGRRV RRRMAQEQEA  240
AALPSAPALT STDGAHQEPL VAAMENSFPQ ITQLPPVSET SPMPVTANGA NEEAVRSVLS  300
PLLKEFITSF AVAGQTGPGM GLNMGFGGAG LNADIAGLGF GIAALNPGVP GTDRWRQQQI  360
LELEVYLKRI ELVREQVTAA LDELRSSEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-19GeBP family protein