PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G16880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GeBP | ||||||||
Protein Properties | Length: 389aa MW: 41295.1 Da PI: 4.8784 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 92.3 | 5.5e-29 | 71 | 173 | 2 | 96 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqk 87 lfqrlw++e e+++L+G++df+a++g+ +++ d+ fy+ +++++sf+++ksqlveK+rrLKkK++ + ++ + ++f+++h+ ONIVA11G16880.1 71 LFQRLWTDEEELLILRGFLDFTARRGTtfASHQyDTGPFYDEIRRRLSFDFTKSQLVEKLRRLKKKYRLCAARmasspHAAAAGFAFRTPHEGA 164 79************************99877778***********************************99996666556677889******** PP DUF573 88 ifelskkiW 96 i++l++ iW ONIVA11G16880.1 165 IYDLARHIW 173 ********* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence |
MAADELAASA SHSSSSSPAD EDDEEGTDSD GSNPDHAAAP HAPPEPTAAI PPPPPPPPPQ 60 PGPGAEDSRR LFQRLWTDEE ELLILRGFLD FTARRGTTFA SHQYDTGPFY DEIRRRLSFD 120 FTKSQLVEKL RRLKKKYRLC AARMASSPHA AAAGFAFRTP HEGAIYDLAR HIWPPALKRD 180 GTASDDDDIN PAAAAAAAAA VTTPVAMEDG FGGSAPTPTP TPRGRGGRRV RRRMAQEQEA 240 AALPSAPALT STDGAHQEPL VAAMENSFPQ ITQLPPVSET SPMPVTANGA NEEAVRSVLS 300 PLLKEFITSF AVAGQTGPGM GLNMGFGGAG LNADIAGLGF GIAALNPGVP GTDRWRQQQI 360 LELEVYLKRI ELVREQVTAA LDELRSSEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 4e-19 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G16880.1 |