PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G15890.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 1357aa MW: 152935 Da PI: 6.0858

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G15890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.6	4.7e-18	74	158	1	86
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+kv tpsdv+++grlv+p ++ae + +++e++ l++ed g+ W++ + r++s lt GW++F + n+L++gD+v F++ ONIVA11G15890.1 74 FDKVVTPSDVGNLGRLVIPWQHAECYfprdvPANEREGVVLRFEDDAGKPWRFLY--RGSS----LTLGWSHFFRKNRLDAGDMVSFYRGA 158 89*******************88899778899***************..9999....*********************543 PP

Sequence ? help Back to Top
Protein Sequence Length: 1357 aa Download sequence
MEPGSSSREG EQQEPANERL TATGGGGGGG GGSPVSDQEL SDGEEVSDGE YQAGDDFSGY 60 AVRGRGFVEK EHIFDKVVTP SDVGNLGRLV IPWQHAECYF PRDVPANERE GVVLRFEDDA 120 GKPWRFLYRG SSLTLGWSHF FRKNRLDAGD MVSFYRGASE ATRDRLFIHS KRRMHILPTL 180 GYSDPQVHIN RLFQLLVRVR TMVSSFGKSG SPSPPNSPLP TVQNFTYKAL KDCLQDLHYY 240 SLLSMMGRNH KSQSTSAKIR DTIPTLDALI QLRSLSDPVF RIPAAATSHC ILLCRGVLGI 300 MGFLCSDENM KEDHRMLQVP AFDDLNYSAQ VKITRMKEQT MPSSLADPIY LLPTAIRNLL 360 YLDLSNCSDI VQLPPSLGSS LHMLSALNLS CCYSLRALPD SLVCLYDLQI LLLSFCHNLQ 420 NLPVSFGDLS NLRLLDLSGC RSLRLFPSSF VNLGSLENLN LSDCIRLMGI PQNFEDLQKL 480 EYLNFAGCYR VDLPVYCLTN LVNLKCLTLS NHTDIKDFPY SFTDLKRHLY LSRWWKYNRV 540 HTQCNLKSYR CHQQRIINSL LSDGSDEGDI TSEQSLTSIC IFGESGTGKT ELLHEIYNDQ 600 KILEGFHLRI WINMCDKKRL LEKIIEFTAC AYCYDAPSSI LEETVREELN GKRFLLVLND 660 ADIENQCFWT DVWKVSNVGA AGSALIVTTR SKEVASLFGA MKPYYMNPLS KEECFMVFQE 720 HAGCGFDINN DHELTKVGWK IVEKCGGNLL CMKALSGLLW HSETALSEID SLVGGIVPAL 780 RLCYDLLPSH LKQCFKFCSL FPKDYVFVKH HIIQLWISQG FVYPEEDSQP EDTGLQYFNE 840 FLCRSFFQHC PFSNDHEDKF VMHELFHDLA CSVSKDESFS SEEPFFSLPE NICHLSLVIS 900 DSNTVVLTKE HRHLQSLMVV RRSATEYSSS FVPLLKILGL NDLLMKCGFL RALNLSCTTI 960 VDLPGSIGRM KHLRFLAMNN TKIKSLPTEI GQLNTLQTLE LKDCCCLIEL PESTKNLMKL 1020 RHLDVQKEPG NIHVGMPSGL GQLTDLQTLT VFNIGDDLSH CSIRDLKNLS GLRGHVHITG 1080 LQNITAGDDA KEANLVGKQF LQALTLEWCC SSEEMEDESD KEIANQVLQN LQPNTSIQEL 1140 AIQNYPGNSF PNWIKDSGLC MLVSITIDNS QDCNEIPYLG DLPCLKFLFI QKMYAVENFG 1200 QRSNSLTTDG KHAPGFPSLE ILNLWEMYSL QFWNGTRYGD FPQLRGLSIS RCPKLSNLPP 1260 LISLLYLSFH CGDQLPTLSE FPSLKSLKIE GFQKLKSVSF CPEMPLLQKL EISDCKELVS 1320 IDAPLLSVSN LKVVRCPKLH FGGSWLEGCL MWEEFKR

Sequence ? help Back to Top

Protein Sequence Length: 1357 aa Download sequence

MEPGSSSREG EQQEPANERL TATGGGGGGG GGSPVSDQEL SDGEEVSDGE YQAGDDFSGY  60
AVRGRGFVEK EHIFDKVVTP SDVGNLGRLV IPWQHAECYF PRDVPANERE GVVLRFEDDA  120
GKPWRFLYRG SSLTLGWSHF FRKNRLDAGD MVSFYRGASE ATRDRLFIHS KRRMHILPTL  180
GYSDPQVHIN RLFQLLVRVR TMVSSFGKSG SPSPPNSPLP TVQNFTYKAL KDCLQDLHYY  240
SLLSMMGRNH KSQSTSAKIR DTIPTLDALI QLRSLSDPVF RIPAAATSHC ILLCRGVLGI  300
MGFLCSDENM KEDHRMLQVP AFDDLNYSAQ VKITRMKEQT MPSSLADPIY LLPTAIRNLL  360
YLDLSNCSDI VQLPPSLGSS LHMLSALNLS CCYSLRALPD SLVCLYDLQI LLLSFCHNLQ  420
NLPVSFGDLS NLRLLDLSGC RSLRLFPSSF VNLGSLENLN LSDCIRLMGI PQNFEDLQKL  480
EYLNFAGCYR VDLPVYCLTN LVNLKCLTLS NHTDIKDFPY SFTDLKRHLY LSRWWKYNRV  540
HTQCNLKSYR CHQQRIINSL LSDGSDEGDI TSEQSLTSIC IFGESGTGKT ELLHEIYNDQ  600
KILEGFHLRI WINMCDKKRL LEKIIEFTAC AYCYDAPSSI LEETVREELN GKRFLLVLND  660
ADIENQCFWT DVWKVSNVGA AGSALIVTTR SKEVASLFGA MKPYYMNPLS KEECFMVFQE  720
HAGCGFDINN DHELTKVGWK IVEKCGGNLL CMKALSGLLW HSETALSEID SLVGGIVPAL  780
RLCYDLLPSH LKQCFKFCSL FPKDYVFVKH HIIQLWISQG FVYPEEDSQP EDTGLQYFNE  840
FLCRSFFQHC PFSNDHEDKF VMHELFHDLA CSVSKDESFS SEEPFFSLPE NICHLSLVIS  900
DSNTVVLTKE HRHLQSLMVV RRSATEYSSS FVPLLKILGL NDLLMKCGFL RALNLSCTTI  960
VDLPGSIGRM KHLRFLAMNN TKIKSLPTEI GQLNTLQTLE LKDCCCLIEL PESTKNLMKL  1020
RHLDVQKEPG NIHVGMPSGL GQLTDLQTLT VFNIGDDLSH CSIRDLKNLS GLRGHVHITG  1080
LQNITAGDDA KEANLVGKQF LQALTLEWCC SSEEMEDESD KEIANQVLQN LQPNTSIQEL  1140
AIQNYPGNSF PNWIKDSGLC MLVSITIDNS QDCNEIPYLG DLPCLKFLFI QKMYAVENFG  1200
QRSNSLTTDG KHAPGFPSLE ILNLWEMYSL QFWNGTRYGD FPQLRGLSIS RCPKLSNLPP  1260
LISLLYLSFH CGDQLPTLSE FPSLKSLKIE GFQKLKSVSF CPEMPLLQKL EISDCKELVS  1320
IDAPLLSVSN LKVVRCPKLH FGGSWLEGCL MWEEFKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-29	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G15890.1