PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G13830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 182aa MW: 20782.7 Da PI: 9.0779 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 23.7 | 5.4e-08 | 3 | 37 | 165 | 200 |
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 L k Ae+l+vpf+fn+ v++rl++l++e+Lrvk+gE ONIVA11G13830.1 3 LMKEAERLDVPFQFNP-VVSRLDALDVESLRVKTGE 37 7899************.7****************99 PP | |||||||
2 | GRAS | 96.5 | 3.9e-30 | 55 | 171 | 235 | 361 |
GRAS 235 sPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvp 328 sPkv+vv+ qea+hn++ + erf+eal+yy+alfd le++++r s e + vEr llg+ei+n+ + he+le+W +rle aGF+ vp ONIVA11G13830.1 55 SPKVMVVTKQEASHNAALLTERFVEALNYYAALFDGLEVGAARGSVEHTRVERWLLGEEIMNI------W----HERLERWVRRLEGAGFGRVP 138 8*************************************************************8......4....89999*************** PP GRAS 329 lsekaakqaklllrkvksdgyrveeesgslvlg 361 ls++a qa+++ + + dg++v ee+g ++l ONIVA11G13830.1 139 LSYYALLQARRVAQGLGCDGFKVREEKGNFFLF 171 ****************************99873 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MALMKEAERL DVPFQFNPVV SRLDALDVES LRVKTGERRS QESGLSPSTS RADASPKVMV 60 VTKQEASHNA ALLTERFVEA LNYYAALFDG LEVGAARGSV EHTRVERWLL GEEIMNIWHE 120 RLERWVRRLE GAGFGRVPLS YYALLQARRV AQGLGCDGFK VREEKGNFFL FFVSTWRGRR 180 FD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-40 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G13830.1 |