PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G08980.5

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 984aa MW: 108755 Da PI: 6.3792

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G08980.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.1e-29	624	674	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ ONIVA11G08980.5 624 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 674 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 984 aa Download sequence
MPPLPISPLT RTVNSSLFHF LFSSSSPPAA SGRPASRAEQ RREPTSIWAP IEAEAVRIEK 60 MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV 120 STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML 180 RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE 240 GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC 300 AVLEVVMTRE KDNFCLEMVN VSNALQAFNN PLFLLCAAQR YAQLQCNTAK YLFKELSTSY 360 SRDQKLALME IFDVLQAVCQ AHLLPLALAW IPVCSKRDVL VSVEYGANFG KRNKEVLCIE 420 ESACYVNDTR MRDFVQVCAE HPLEKGQGVA GNAYLSNNPF FSSDVKDYDM HAYPLVNHAR 480 KFGLHAAVAI RLRSTYTKND DYVLEFFLPV LCKGGGEQQL LLDSISVTMR RVCKSLRTVS 540 DAELKEDVTR KPSNENRSGT RCPSPVNLIY SGREIDVSNE TKTNTPLEYQ IEGIDEQLSD 600 TKSTNKLIKC SNASDGEKRR SSTEKSVSLS VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ 660 HGISRWPSRK IKKVNRSLKK IQNVISSVHG VEGVLKYDPS TGCLVSSVSP SIEPVLMNVE 720 HKGSDPLPIE SELPHLNFEP DCDAYRREHA GQDVLQKLQN KQNGEINFDM DDGELFRNSH 780 STRTLSGAFC EDMPNGLYVA REMTCVAKTG TRTERLEHKP SSRDTFSAPQ EYRMESETDK 840 SNKNSKQSLP SSSSMTDCST SSGETFKSIK SQSANESNKT VAVKASYKND TIRFKLLPSM 900 KYEQLLEEIA KRLKLSIGLF QLKYKDDEGD WVILASDADL QECLEILDTT RLRILKLQVQ 960 DVVCPIGSSS ERCGFGSTVI DLFI

Sequence ? help Back to Top

Protein Sequence Length: 984 aa Download sequence

MPPLPISPLT RTVNSSLFHF LFSSSSPPAA SGRPASRAEQ RREPTSIWAP IEAEAVRIEK  60
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV  120
STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML  180
RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE  240
GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC  300
AVLEVVMTRE KDNFCLEMVN VSNALQAFNN PLFLLCAAQR YAQLQCNTAK YLFKELSTSY  360
SRDQKLALME IFDVLQAVCQ AHLLPLALAW IPVCSKRDVL VSVEYGANFG KRNKEVLCIE  420
ESACYVNDTR MRDFVQVCAE HPLEKGQGVA GNAYLSNNPF FSSDVKDYDM HAYPLVNHAR  480
KFGLHAAVAI RLRSTYTKND DYVLEFFLPV LCKGGGEQQL LLDSISVTMR RVCKSLRTVS  540
DAELKEDVTR KPSNENRSGT RCPSPVNLIY SGREIDVSNE TKTNTPLEYQ IEGIDEQLSD  600
TKSTNKLIKC SNASDGEKRR SSTEKSVSLS VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ  660
HGISRWPSRK IKKVNRSLKK IQNVISSVHG VEGVLKYDPS TGCLVSSVSP SIEPVLMNVE  720
HKGSDPLPIE SELPHLNFEP DCDAYRREHA GQDVLQKLQN KQNGEINFDM DDGELFRNSH  780
STRTLSGAFC EDMPNGLYVA REMTCVAKTG TRTERLEHKP SSRDTFSAPQ EYRMESETDK  840
SNKNSKQSLP SSSSMTDCST SSGETFKSIK SQSANESNKT VAVKASYKND TIRFKLLPSM  900
KYEQLLEEIA KRLKLSIGLF QLKYKDDEGD WVILASDADL QECLEILDTT RLRILKLQVQ  960
DVVCPIGSSS ERCGFGSTVI DLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-174	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G08980.5