PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G02940.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 586aa    MW: 63441.4 Da    PI: 7.9098
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G02940.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS302.21.2e-92344814374
             GRAS   4 lLlecAeavssgdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkf 93 
                      +LlecA +v++g +e+a+++Lar   l  a+ +g  p +Rla  ++  La+rl+r v+ + +al  ps     +  ++ aa++ f+e+sP++k+
  ONIVA11G02940.3  34 ALLECAAHVETGPMEKATRCLARATGLaaAAAAGdGPRKRLAVAMVDCLARRLLRPVQAITDALiDPSVYL--DRRSVRAARRGFFELSPFPKV 125
                      79*********************99996555556479***********************99995444443..34555578899********** PP

             GRAS  94 shltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                      ++++ N+aI+eave+e+ vH++ ++   +q+ QW+ Ll++L  Rpegpp  +R+T+v++    + e l +++e  ++ Aeelg++f+f+  v+ 
  ONIVA11G02940.3 126 AFVVGNRAIVEAVENESLVHVVGMSgpFTQPCQWIQLLHELRRRPEGPPrVVRLTVVHD----DGELLAKMEELVSDEAEELGMEFQFHG-VVG 214
                      ************************86679****************9988789*******....***************************.799 PP

             GRAS 185 rledleleeL....rvkpgEalaVnlvlqlhrll............................................................ 214
                      +ledl++++L    ++k+gEal+V++ lqlhrll                                                            
  ONIVA11G02940.3 215 QLEDLDFSNLrnvlEIKSGEALVVSCTLQLHRLLaadddamyssrsahlnqmasiaqlqhmavnscpsssgggsvqykdddpyrspatpltfvs 308
                      9****9999866667889**************************************************************************** PP

             GRAS 215 ........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres........eerikvErellg 291
                              + +++l     ++L++v+ lsPk++vv+eq+adhn+ sF +rf+eal++y+a+fdsl +a ++++s        +er+ vEr+++g
  ONIVA11G02940.3 309 ppvstphfQTPAAL----ASFLSAVRALSPKILVVAEQDADHNGVSFRKRFCEALHHYAAVFDSLdDAAAATTSaashlwspDERAQVERVVVG 398
                      *9986555555555....55*********************************************766666666788899999*********** PP

             GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +ei+ v+   ga+rre h +l++W +r+e+aGF+ vpls+ a  + + ++r+++ +  + +e  g+l+l+W++rpL+s+SaWr
  ONIVA11G02940.3 399 EEIKGVLLRDGAHRREWHDRLRQWAARMEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENKECGGCLLLCWSSRPLYSISAWR 481
                      ******************************************************887999999*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MFSGTDASSP ELSLCSPYGP WTQGRSPTEE LGLALLECAA HVETGPMEKA TRCLARATGL  60
AAAAAAGDGP RKRLAVAMVD CLARRLLRPV QAITDALIDP SVYLDRRSVR AARRGFFELS  120
PFPKVAFVVG NRAIVEAVEN ESLVHVVGMS GPFTQPCQWI QLLHELRRRP EGPPRVVRLT  180
VVHDDGELLA KMEELVSDEA EELGMEFQFH GVVGQLEDLD FSNLRNVLEI KSGEALVVSC  240
TLQLHRLLAA DDDAMYSSRS AHLNQMASIA QLQHMAVNSC PSSSGGGSVQ YKDDDPYRSP  300
ATPLTFVSPP VSTPHFQTPA ALASFLSAVR ALSPKILVVA EQDADHNGVS FRKRFCEALH  360
HYAAVFDSLD DAAAATTSAA SHLWSPDERA QVERVVVGEE IKGVLLRDGA HRREWHDRLR  420
QWAARMEMAG FTGVPLSYAA IRKGNDMVRR CGLRRCENKE CGGCLLLCWS SRPLYSISAW  480
RPAASRGSGS GSERSDPHTD PPCRVGRSAA APAMSASLHR PALASLLQIG AGGCGVLGVF  540
APGPRFPCRG YHPCRSSSTL GSASLTPRRW HISPPGLRIR DVLLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-70GRAS family protein