PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G02940.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 778aa    MW: 87165.7 Da    PI: 7.312
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G02940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS272.41.4e-83204352374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfs 94 
                      v lL ecA +v++g++e+a+   ++++ l   ++ p+qRl + ++  La+rl++s ++l  al  ps+    + s+  aa++ f+++ P+l  +
  ONIVA11G02940.2  20 VPLLHECASHVTEGSFEKADFSFKKIRILT-IADGPLQRLSTIIVDSLAHRLLSSIQGLPGALiDPSDYF--EKSTLRAARHNFFKLNPYLSTG 110
                      6789**********************9875.5667*******************9999998874444443..35555567778*********** PP

             GRAS  95 hltaNqaIleavegeervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                      ++t N aI+ea+e e+ vHi+D++ s  ++ QW+ Ll+ +  Rp+g+p+l +T++++    +++ l  +++ L+k Ae+lgv+f+f   v  rl
  ONIVA11G02940.2 111 FVTINWAIMEAMEDEKVVHIVDLSCSaaHPWQWLKLLDDFHGRPGGAPELYLTVLHD----DNDFLADMQSLLSKKAESLGVSFHFIS-VIGRL 199
                      ***********************8653389***************************....9**************************.799** PP

             GRAS 187 edleleeLrvkp....gEalaVnlvlqlhrll.........................................desvsleserdevLklvksls 235
                      e+l++++Lr       g a+a++++lq+hrll                                           s  +++   ++L++++ l+
  ONIVA11G02940.2 200 ETLDFSNLRSTFqikfGVAVAISCALQMHRLLlvddnlsstsiaqlqkmanftqpkqmassvcspastlnylqTPSPRTPKLLARLLSAIQALK 293
                      ********54444555*******************************************************98666777778899********* PP

             GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkp 326
                      P+++ ++eq+adhn+  F +rf e l+yy+alfd+++a ++++    +er  vEr++l++ei+n++ ceg +r erhe+l +W + +ee+GF++
  ONIVA11G02940.2 294 PNIMLIMEQDADHNTLLFRDRFNEVLNYYAALFDCFHAVAAANPgrtDERLRVERMILREEIKNILVCEGVHRHERHERLDQWAMHMEESGFHN 387
                      ************************************77654444456*********************************************** PP

             GRAS 327 vplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      v+ls +a  + k  l  ++ +  + +e++g+++l+W   +L+s+SaWr
  ONIVA11G02940.2 388 VQLSFSAIREGKENLLSFGLKNCQNKEDRGCFLLCWGYTNLYSISAWR 435
                      *******************888*************************8 PP
2GRAS46.18.6e-15525621298
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      + lL++cA  vs+g++ +a+ +L+++ +las d+  ++qRlaa+f+ ALa++l++  ++l++al +s++s +    +  a++  ++v P+lk++
  ONIVA11G02940.2 525 IGLLYQCAAEVSAGSFDRANLCLEHITQLASLDApHALQRLAAVFADALARKLLNLIPGLSRALLSSANSADA-HLVPVARRHMFDVLPFLKLA 617
                      679*******************************9*****************************888887544.44446778899********* PP

             GRAS  95 hlta 98 
                      +l a
  ONIVA11G02940.2 618 FLSA 621
                      9987 PP
3GRAS163.71.6e-50617767226374
             GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                      ++L++v+slsPk++v++eqea+hn++ F erf eal+yy++lfd+l+ + ++++ er+ vEr+llg+ei+ vvacegaer+erhe++++W +r+
  ONIVA11G02940.2 617 AFLSAVRSLSPKIMVMTEQEANHNGGAFQERFDEALNYYASLFDCLQRS-AAAAAERARVERVLLGEEIRGVVACEGAERVERHERARQWAARM 709
                      59********************************************999.68889*************************************** PP

             GRAS 320 eeaGFkpvplsekaakqaklllrkvksdg.yrveee..sgslvlgWkdrpLvsvSaWr 374
                      e+aG++ v ls++ a++a+ ll+ +++ g y+v ++   + ++++W++rpL++v+aWr
  ONIVA11G02940.2 710 EAAGMERVGLSYSGAMEARKLLQSCGWAGpYEVRHDagGHGFFFCWHKRPLYAVTAWR 767
                      **************************8888****884345678**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 778 aa     Download sequence    
MMHGLWVQDQ GVVDHLAQLV PLLHECASHV TEGSFEKADF SFKKIRILTI ADGPLQRLST  60
IIVDSLAHRL LSSIQGLPGA LIDPSDYFEK STLRAARHNF FKLNPYLSTG FVTINWAIME  120
AMEDEKVVHI VDLSCSAAHP WQWLKLLDDF HGRPGGAPEL YLTVLHDDND FLADMQSLLS  180
KKAESLGVSF HFISVIGRLE TLDFSNLRST FQIKFGVAVA ISCALQMHRL LLVDDNLSST  240
SIAQLQKMAN FTQPKQMASS VCSPASTLNY LQTPSPRTPK LLARLLSAIQ ALKPNIMLIM  300
EQDADHNTLL FRDRFNEVLN YYAALFDCFH AVAAANPGRT DERLRVERMI LREEIKNILV  360
CEGVHRHERH ERLDQWAMHM EESGFHNVQL SFSAIREGKE NLLSFGLKNC QNKEDRGCFL  420
LCWGYTNLYS ISAWRQNRGS SSGSREHILH PNFPLWVLCS AYVWQLKVQA DNLRLCCTDR  480
GMFQDDMLSS ATSSPASSVY SPSPSPSNGS WVQELSHDQQ SVRLIGLLYQ CAAEVSAGSF  540
DRANLCLEHI TQLASLDAPH ALQRLAAVFA DALARKLLNL IPGLSRALLS SANSADAHLV  600
PVARRHMFDV LPFLKLAFLS AVRSLSPKIM VMTEQEANHN GGAFQERFDE ALNYYASLFD  660
CLQRSAAAAA ERARVERVLL GEEIRGVVAC EGAERVERHE RARQWAARME AAGMERVGLS  720
YSGAMEARKL LQSCGWAGPY EVRHDAGGHG FFFCWHKRPL YAVTAWRPAA SRRGYTRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.16e-77GRAS family protein