PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G02940.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 1235aa    MW: 136113 Da    PI: 7.7484
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G02940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS299.48.7e-92344814374
             GRAS   4 lLlecAeavssgdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkf 93 
                      +LlecA +v++g +e+a+++Lar   l  a+ +g  p +Rla  ++  La+rl+r v+ + +al  ps     +  ++ aa++ f+e+sP++k+
  ONIVA11G02940.1  34 ALLECAAHVETGPMEKATRCLARATGLaaAAAAGdGPRKRLAVAMVDCLARRLLRPVQAITDALiDPSVYL--DRRSVRAARRGFFELSPFPKV 125
                      69*********************99996555556479***********************99995444443..34555578899********** PP

             GRAS  94 shltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                      ++++ N+aI+eave+e+ vH++ ++   +q+ QW+ Ll++L  Rpegpp  +R+T+v++    + e l +++e  ++ Aeelg++f+f+  v+ 
  ONIVA11G02940.1 126 AFVVGNRAIVEAVENESLVHVVGMSgpFTQPCQWIQLLHELRRRPEGPPrVVRLTVVHD----DGELLAKMEELVSDEAEELGMEFQFHG-VVG 214
                      ************************86679****************9988789*******....***************************.799 PP

             GRAS 185 rledleleeL....rvkpgEalaVnlvlqlhrll............................................................ 214
                      +ledl++++L    ++k+gEal+V++ lqlhrll                                                            
  ONIVA11G02940.1 215 QLEDLDFSNLrnvlEIKSGEALVVSCTLQLHRLLaadddamyssrsahlnqmasiaqlqhmavnscpsssgggsvqykdddpyrspatpltfvs 308
                      9****9999866667889**************************************************************************** PP

             GRAS 215 ........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres........eerikvErellg 291
                              + +++l     ++L++v+ lsPk++vv+eq+adhn+ sF +rf+eal++y+a+fdsl +a ++++s        +er+ vEr+++g
  ONIVA11G02940.1 309 ppvstphfQTPAAL----ASFLSAVRALSPKILVVAEQDADHNGVSFRKRFCEALHHYAAVFDSLdDAAAATTSaashlwspDERAQVERVVVG 398
                      *9986555555555....55*********************************************766666666788899999*********** PP

             GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +ei+ v+   ga+rre h +l++W +r+e+aGF+ vpls+ a  + + ++r+++ +  + +e  g+l+l+W++rpL+s+SaWr
  ONIVA11G02940.1 399 EEIKGVLLRDGAHRREWHDRLRQWAARMEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENKECGGCLLLCWSSRPLYSISAWR 481
                      ******************************************************887999999*******************8 PP
2GRAS211.64.2e-65584892111374
             GRAS 111 rvHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.... 198
                       vHi+D++ s  ++ QW+ Ll+ +  Rp+g+p+l +T++++    +++ l  +++ L+k Ae+lgv+f+f   v  rle+l++++Lr       
  ONIVA11G02940.1 584 VVHIVDLSCSaaHPWQWLKLLDDFHGRPGGAPELYLTVLHD----DNDFLADMQSLLSKKAESLGVSFHFIS-VIGRLETLDFSNLRSTFqikf 672
                      59*****8653389***************************....9**************************.799**********54444555 PP

             GRAS 199 gEalaVnlvlqlhrll.........................................desvsleserdevLklvkslsPkvvvvveqeadhnse 251
                      g a+a++++lq+hrll                                           s  +++   ++L++++ l+P+++ ++eq+adhn+ 
  ONIVA11G02940.1 673 GVAVAISCALQMHRLLlvddnlsstsiaqlqkmanftqpkqmassvcspastlnylqTPSPRTPKLLARLLSAIQALKPNIMLIMEQDADHNTL 766
                      *******************************************************98666777778899************************* PP

             GRAS 252 sFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342
                       F +rf e l+yy+alfd+++a ++++    +er  vEr++l++ei+n++ ceg +r erhe+l +W + +ee+GF++v+ls +a  + k  l 
  ONIVA11G02940.1 767 LFRDRFNEVLNYYAALFDCFHAVAAANPgrtDERLRVERMILREEIKNILVCEGVHRHERHERLDQWAMHMEESGFHNVQLSFSAIREGKENLL 860
                      ********************77654444456*************************************************************** PP

             GRAS 343 kvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       ++ +  + +e++g+++l+W   +L+s+SaWr
  ONIVA11G02940.1 861 SFGLKNCQNKEDRGCFLLCWGYTNLYSISAWR 892
                      ***888*************************8 PP
3GRAS45.21.6e-149821078298
             GRAS    2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92  
                       + lL++cA  vs+g++ +a+ +L+++ +las d+  ++qRlaa+f+ ALa++l++  ++l++al +s++s +    +  a++  ++v P+lk
  ONIVA11G02940.1  982 IGLLYQCAAEVSAGSFDRANLCLEHITQLASLDApHALQRLAAVFADALARKLLNLIPGLSRALLSSANSADA-HLVPVARRHMFDVLPFLK 1072
                       679*******************************9*****************************888887544.44446778899******* PP

             GRAS   93 fshlta 98  
                       +++l a
  ONIVA11G02940.1 1073 LAFLSA 1078
                       **9987 PP
4GRAS162.73.1e-5010741224226374
             GRAS  226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWre 317 
                       ++L++v+slsPk++v++eqea+hn++ F erf eal+yy++lfd+l+ + ++++ er+ vEr+llg+ei+ vvacegaer+erhe++++W +
  ONIVA11G02940.1 1074 AFLSAVRSLSPKIMVMTEQEANHNGGAFQERFDEALNYYASLFDCLQRS-AAAAAERARVERVLLGEEIRGVVACEGAERVERHERARQWAA 1164
                       59********************************************999.68889************************************* PP

             GRAS  318 rleeaGFkpvplsekaakqaklllrkvksdg.yrveee..sgslvlgWkdrpLvsvSaWr 374 
                       r+e+aG++ v ls++ a++a+ ll+ +++ g y+v ++   + ++++W++rpL++v+aWr
  ONIVA11G02940.1 1165 RMEAAGMERVGLSYSGAMEARKLLQSCGWAGpYEVRHDagGHGFFFCWHKRPLYAVTAWR 1224
                       ****************************8888****884345678**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1235 aa     Download sequence    
MFSGTDASSP ELSLCSPYGP WTQGRSPTEE LGLALLECAA HVETGPMEKA TRCLARATGL  60
AAAAAAGDGP RKRLAVAMVD CLARRLLRPV QAITDALIDP SVYLDRRSVR AARRGFFELS  120
PFPKVAFVVG NRAIVEAVEN ESLVHVVGMS GPFTQPCQWI QLLHELRRRP EGPPRVVRLT  180
VVHDDGELLA KMEELVSDEA EELGMEFQFH GVVGQLEDLD FSNLRNVLEI KSGEALVVSC  240
TLQLHRLLAA DDDAMYSSRS AHLNQMASIA QLQHMAVNSC PSSSGGGSVQ YKDDDPYRSP  300
ATPLTFVSPP VSTPHFQTPA ALASFLSAVR ALSPKILVVA EQDADHNGVS FRKRFCEALH  360
HYAAVFDSLD DAAAATTSAA SHLWSPDERA QVERVVVGEE IKGVLLRDGA HRREWHDRLR  420
QWAARMEMAG FTGVPLSYAA IRKGNDMVRR CGLRRCENKE CGGCLLLCWS SRPLYSISAW  480
RPAASRGSGS GSERSDPHTD PPCRVGRSAA APAMSASLHR PALASLLQIG AGGCGVLGVF  540
APGPRFPCRG YHPCRSSSTL GSASLTPRRW HISPPGLRIR DVLVVHIVDL SCSAAHPWQW  600
LKLLDDFHGR PGGAPELYLT VLHDDNDFLA DMQSLLSKKA ESLGVSFHFI SVIGRLETLD  660
FSNLRSTFQI KFGVAVAISC ALQMHRLLLV DDNLSSTSIA QLQKMANFTQ PKQMASSVCS  720
PASTLNYLQT PSPRTPKLLA RLLSAIQALK PNIMLIMEQD ADHNTLLFRD RFNEVLNYYA  780
ALFDCFHAVA AANPGRTDER LRVERMILRE EIKNILVCEG VHRHERHERL DQWAMHMEES  840
GFHNVQLSFS AIREGKENLL SFGLKNCQNK EDRGCFLLCW GYTNLYSISA WRQNRGSSSG  900
SREHILHPNF PLWVLCSAYV WQLKVQADNL RLCCTDRGMF QDDMLSSATS SPASSVYSPS  960
PSPSNGSWVQ ELSHDQQSVR LIGLLYQCAA EVSAGSFDRA NLCLEHITQL ASLDAPHALQ  1020
RLAAVFADAL ARKLLNLIPG LSRALLSSAN SADAHLVPVA RRHMFDVLPF LKLAFLSAVR  1080
SLSPKIMVMT EQEANHNGGA FQERFDEALN YYASLFDCLQ RSAAAAAERA RVERVLLGEE  1140
IRGVVACEGA ERVERHERAR QWAARMEAAG MERVGLSYSG AMEARKLLQS CGWAGPYEVR  1200
HDAGGHGFFF CWHKRPLYAV TAWRPAASRR GYTRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.19e-67GRAS family protein