PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G01600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 218aa MW: 23841 Da PI: 5.6487 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 216.9 | 1e-66 | 2 | 211 | 156 | 374 |
GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhn 249 e+le+tg+rL++fA++lg+pfef + va++ +l++e+L v ++Ea+aV++ h+l+d ++s ++ +L+l+++l Pkvv++veq+++h ONIVA11G01600.1 2 EALEATGKRLSDFADTLGLPFEFCP-VADKAGNLDPEKLGVTRREAVAVHWLR--HSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLSH- 87 689**********************.7************************99..999999999999....**********************. PP GRAS 250 sesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343 s+sFl+rf+ea++yysalfdsl+a+++++s er++vE++ll+rei+nv+a g +r+ + + +++Wre+l ++GF+ +l +aa+qa lll + ONIVA11G01600.1 88 SGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGM 180 899****************************************************999987.******************************** PP GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++sdgy++ ee+g+l lgWkd L+++SaWr ONIVA11G01600.1 181 FPSDGYTLIEENGALKLGWKDLCLLTASAWR 211 ******************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MEALEATGKR LSDFADTLGL PFEFCPVADK AGNLDPEKLG VTRREAVAVH WLRHSLYDVT 60 GSDSNTLWLI QRLAPKVVTM VEQDLSHSGS FLARFVEAIH YYSALFDSLD ASYSEDSPER 120 HVVEQQLLSR EIRNVLAVGG PARTGDVKFG SWREKLAQSG FRVSSLAGSA AAQAALLLGM 180 FPSDGYTLIE ENGALKLGWK DLCLLTASAW RPIQASGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 1e-114 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G01600.1 |