PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01070.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 672aa    MW: 73271.3 Da    PI: 6.7778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.16.6e-22129189359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59 
                      Dgy+WrKYGqK+++g+ +prsYYrCt +   gC +kk v+r+   + +  ++ Y +eH+++
  ONIVA11G01070.1 129 DGYQWRKYGQKQIEGAMYPRSYYRCTNStnqGCLAKKTVQRNGGGGAAgYTVAYISEHTCK 189
                      9************************9888889**********98776537899*****997 PP
2WRKY53.25.9e-17510564356
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES-- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeH 56 
                      Dg++WrKYGqK++++s++prsYYrC+++   +C+++k v++ + d +  +  Y+g+H
  ONIVA11G01070.1 510 DGHQWRKYGQKHINNSKHPRSYYRCAYRqeeKCKATKTVQQRE-DLQHAN-SYNGDH 564
                      9**************************99999********987.444332.344444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
MEEAYCMMMV GRERELVAEL RHLLFPSPSP TTPASHSTTA LTGDDECLPP GLTTTTTVSG  60
GGGRRRGRKR VRRDNDNLKL LQADDDQEVL AAAVHGDANA KPLPNFTKTS RRKLQTTTST  120
MVTTVPDFDG YQWRKYGQKQ IEGAMYPRSY YRCTNSTNQG CLAKKTVQRN GGGGAAGYTV  180
AYISEHTCKS IEPSLPPVIL DTTVRATNNH HPPAASSSCA AQSPAAAATS SSSDMMMTST  240
SSTSSETGNW SGQHGAYACR RQMIAADEEY CCWDTPATTT TSGSDGGNSS TCADQVIDLM  300
SGPIRSPLHI AADGNWTKED DMLRYKLERV PFLEEKDPAT LGSCPGSGAA CIIRLVLNHG  360
IKEMKNSSNK RPLVADQWHP SSVCCDHRAA LREIARGQSL VTQLRAIVLP ALHSDERGDL  420
AAQMLEGILD CSRKAISELQ LQLSSDSPHD DDGHLDDKRR VRKIVSSSSD DDDHSSSKAA  480
EDHNAKPLRQ HKRRRFGDSV SLETPVPHYD GHQWRKYGQK HINNSKHPRS YYRCAYRQEE  540
KCKATKTVQQ REDLQHANSY NGDHPVMYTV VYYGQHTCCK GPVASADDHV VVEASQISTD  600
SHCQSPGSSS SELQAAAHAG DSSQCSNISV TCSSSVVVED CNKLLDMLPA ADELTTDVLG  660
SDPQPPQYST YL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16573RRGRKRVRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-17WRKY family protein