PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G21500.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

STAT

Protein Properties

Length: 690aa MW: 76371.1 Da PI: 5.866

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G21500.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	188.5	8.1e-59	258	378	1	121
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklk 93 l+v+l++a+g+++ kd e+vasL+yad+g++veks dd+e+pLLis+dG+e+++++rpl+++rGra+fklkisqLsskcdn+Lfri f+++ +k ONIVA10G21500.3 258 LEVILVDAFGEAA-KDREIVASLVYADNGALVEKSrDDSEPPLLISCDGIEYPAVSRPLPIIRGRALFKLKISQLSSKCDNKLFRIFFSTLGMK 350 79********7.*****************9****************************************************** PP STAT 94 kypfleavskpirCisrsrntrsssltk 121 +ypflea+skpirCisr+r++r+++++k ONIVA10G21500.3 351 RYPFLEAYSKPIRCISRNRTSRPLGSAK 378 ********************988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MASSGLRRRG ERESGTKPSP PPTSRSAAAR PPMAAPPGRG GADGYCDLPD VRLELDPGKV 60 RGGGGGFTVC FWLYLSSSAR PSSVILHQVA EGGGDKVPFL ALGEGNKLIL FPFLGFHREA 120 PTPDSSYPWT DITNLTEVNE CPLDNWFHVG CEVTENIMRL HIDGDLVAET HLHSLYNEPD 180 YQDDANQINL LGSEDKLEGY VYNMELSCML GNIQQQFAKN PPFKLSIDYS CSDGIEEGDD 240 GIWNIVGGKA SCRRNFILEV ILVDAFGEAA KDREIVASLV YADNGALVEK SRDDSEPPLL 300 ISCDGIEYPA VSRPLPIIRG RALFKLKISQ LSSKCDNKLF RIFFSTLGMK RYPFLEAYSK 360 PIRCISRNRT SRPLGSAKRI GSASMDDIKS INNCEGFGHS GKANGRLQTH DPSSVNKHAK 420 KMVLDKGAQD VMVSDSTASD YDSMDAGSSW SLSDGDDVES FSDAEIFRYC LDGTHERSKF 480 LRAAAPSVNE DDLIKLANQV SLYSGCTHHR NQILISKQLL QEGADIWSII SKNNERALWS 540 SAVPEMKAKF LEIVHPSNRG LSEQDFEVLR GIAGCGDDIG RDEFDKLWSW LYPVAIALSK 600 DKINRLWDFT AHRWIEGLIT LQETENALRS SRDRLMKPGT FVLRFPTTRS WPHPDAGSLV 660 VTYVGSDNSI HHRLLSLDVR VDRLPSSMQS

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MASSGLRRRG ERESGTKPSP PPTSRSAAAR PPMAAPPGRG GADGYCDLPD VRLELDPGKV  60
RGGGGGFTVC FWLYLSSSAR PSSVILHQVA EGGGDKVPFL ALGEGNKLIL FPFLGFHREA  120
PTPDSSYPWT DITNLTEVNE CPLDNWFHVG CEVTENIMRL HIDGDLVAET HLHSLYNEPD  180
YQDDANQINL LGSEDKLEGY VYNMELSCML GNIQQQFAKN PPFKLSIDYS CSDGIEEGDD  240
GIWNIVGGKA SCRRNFILEV ILVDAFGEAA KDREIVASLV YADNGALVEK SRDDSEPPLL  300
ISCDGIEYPA VSRPLPIIRG RALFKLKISQ LSSKCDNKLF RIFFSTLGMK RYPFLEAYSK  360
PIRCISRNRT SRPLGSAKRI GSASMDDIKS INNCEGFGHS GKANGRLQTH DPSSVNKHAK  420
KMVLDKGAQD VMVSDSTASD YDSMDAGSSW SLSDGDDVES FSDAEIFRYC LDGTHERSKF  480
LRAAAPSVNE DDLIKLANQV SLYSGCTHHR NQILISKQLL QEGADIWSII SKNNERALWS  540
SAVPEMKAKF LEIVHPSNRG LSEQDFEVLR GIAGCGDDIG RDEFDKLWSW LYPVAIALSK  600
DKINRLWDFT AHRWIEGLIT LQETENALRS SRDRLMKPGT FVLRFPTTRS WPHPDAGSLV  660
VTYVGSDNSI HHRLLSLDVR VDRLPSSMQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-145	STAT family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G21500.3