PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G19680.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 361aa MW: 38565.2 Da PI: 4.8559

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G19680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.4	7.1e-10	201	243	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++P + K++ +iL ++ Y+k+L ONIVA10G19680.1 201 MAERRRRKRLNDRLSMLRSVVPRiS------KMDRTSILGDTIGYVKEL 243 79*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MELMDDDGSS SLLEELMAPL RRGTPTTTPE DLWLQAYPMM MSPMCGDGVV LGDLLVGGGN 60 ARNTLASPPP PPPSFPLPVP LTTTTPCPPL HEVSFEFDSI DCLGEVCNPY KRSGGAVRAT 120 AAAQVMVAAM DPRREAASSA VAVAAVEEEE RCKARRGAGG GGDSGELAPM FVFGGGGGAA 180 ASVRPRSCRP PQPGAPSKNL MAERRRRKRL NDRLSMLRSV VPRISKMDRT SILGDTIGYV 240 KELMDRIKNL QVEAATGDSS SSSTENLSML KLNTLKPPPR ENGSTRIEMA CAAIPELLPS 300 TLAALEALGV EIEQCVISCF DDFAMQASCL QDDKKREMTR DTEEIKQTLF RSAGYGDGCL 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MELMDDDGSS SLLEELMAPL RRGTPTTTPE DLWLQAYPMM MSPMCGDGVV LGDLLVGGGN  60
ARNTLASPPP PPPSFPLPVP LTTTTPCPPL HEVSFEFDSI DCLGEVCNPY KRSGGAVRAT  120
AAAQVMVAAM DPRREAASSA VAVAAVEEEE RCKARRGAGG GGDSGELAPM FVFGGGGGAA  180
ASVRPRSCRP PQPGAPSKNL MAERRRRKRL NDRLSMLRSV VPRISKMDRT SILGDTIGYV  240
KELMDRIKNL QVEAATGDSS SSSTENLSML KLNTLKPPPR ENGSTRIEMA CAAIPELLPS  300
TLAALEALGV EIEQCVISCF DDFAMQASCL QDDKKREMTR DTEEIKQTLF RSAGYGDGCL  360
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	210	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	4e-48	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G19680.1