PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA10G19630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 109aa MW: 11217.5 Da PI: 10.562 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 34.8 | 2.9e-11 | 65 | 109 | 2 | 46 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkv 46 rk+ +++k+q +Le+ F+k+++++ ++++ LA++l+L+ rqV v ONIVA10G19630.1 65 RKKLRLSKDQAAVLEDTFNKHNTLNPKQKAALARQLNLKPRQVEV 109 788899*************************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 109 aa Download sequence |
WAGTREAEGA EAAPAAAVGW TVRLLPVVSS PNSTLSSLSG KRGAPSAAAA AVGGSDDGDS 60 GDGSRKKLRL SKDQAAVLED TFNKHNTLNP KQKAALARQL NLKPRQVEV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 64 | 70 | SRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06710.1 | 3e-19 | HD-ZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA10G19630.1 |