PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G16300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | Dof | ||||||||
Protein Properties | Length: 214aa MW: 21281.6 Da PI: 9.2702 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 104.8 | 4.9e-33 | 53 | 109 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC s+ntkfCyynnys +qPry+CkaCrr+Wt+GG+lr+vPvGggr+++k++ ONIVA10G16300.1 53 PRQCPRCGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSKRA 109 679***********************************************9998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVFDDDLGVQ GQGYAAAANG GIGGGGVEAV NAAAAPRQGG RHAGHPPLPR PPPRQCPRCG 60 SANTKFCYYN NYSRTQPRYL CKACRRHWTE GGTLRDVPVG GGRKNSKRAA GGGKAGATAS 120 TAASAHVVAP AAAPPTSSSF PDLLRQMLMA PATAGGGGGY SIDLTAWQQM AAFAAPPQAA 180 TGDVGGAVGA ASTAAPDANC GGGGVQYWNG TNGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.2 | 4e-18 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA10G16300.1 |