PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G10810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 124aa MW: 13306.5 Da PI: 9.41 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 9.6e-21 | 11 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrdp + +r++lg+f+taeeAa+a+++a+ + +g ONIVA10G10810.1 11 TKYRGVRRRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARAYDRAAYAQRG 62 69********.**********8333..4***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MEDNRSKDTA TKYRGVRRRP WGKFAAEIRD PERGGARVWL GTFDTAEEAA RAYDRAAYAQ 60 RGAAAVLNFP AAAAAGRGGG AGGAASGSSS SSSAQRGRGD KIEFEYLDDK VLDDLLDDEK 120 YRGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 1e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA10G10810.1 |