PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G10740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 259aa MW: 29043.4 Da PI: 10.6467 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22 | 3.7e-07 | 182 | 229 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 WT E lv++v ++G g+W+ r + Rt ++k++w+++l ONIVA10G10740.1 182 HWTIKEVTNLVQGVSKHGVGRWTELKRDFFstSIRTSVHLKDKWRNLL 229 6****************************99989************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEKIRGCCGL RTVVSGWELC ISWAMEKAAA AACGWRKGLE EGEPEWEAME LEAAAPAIFP 60 ADGGGGGGRR SPAAWRIYFN QHMRMTSTIC YKGPKMKQTW TNGQSCSPAA EGSITVQTPT 120 YPILNLVDFI PKDGCKRGPR GARKRQTFPS RGARTRRAFP LQQLCFGTTR NKRCRLRKNN 180 DHWTIKEVTN LVQGVSKHGV GRWTELKRDF FSTSIRTSVH LKDKWRNLLK ACGIDFTSTA 240 KIRQYSAPRN PKSGSYPEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 2e-15 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA10G10740.1 |