PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G10210.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 371aa MW: 39554.1 Da PI: 5.5681

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G10210.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.7	8.5e-08	313	346	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + ONIVA10G10210.3 313 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 346 569*****************************87 PP
2	ELK	26.5	1.4e-09	267	288	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ ONIVA10G10210.3 267 ELKHELKQGYKEKLIDIREEIL 288 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MAFHGHLPHE MTMQALGADD AAVAAAAAAG GVGAGGAPAW MRYNDGSFLH LQTTSDSSAS 60 PSGAAAAAAA AAAAGVQQWM GGGGGGEDAV AAAMGGGGEA DAARCKAEIL AHPLYEQLLS 120 AHVACLRIAT PVDQLPRIDA QLAQSQGVVA KYSALAAAAA GDDGRELDQF MTHYVLLLCS 180 FKEQLQQHVR VHAMEAVMAC WELEQNLQSL TGASPGEGTG ATMSDGEDDQ ADSEANMYDP 240 SLDGADNMGF GLPTESERSL MERVRQELKH ELKQGYKEKL IDIREEILRK RRAGKLPGDT 300 TSTLKAWWQS HAKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSTSVKT 360 KRKSNAGDNN S

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MAFHGHLPHE MTMQALGADD AAVAAAAAAG GVGAGGAPAW MRYNDGSFLH LQTTSDSSAS  60
PSGAAAAAAA AAAAGVQQWM GGGGGGEDAV AAAMGGGGEA DAARCKAEIL AHPLYEQLLS  120
AHVACLRIAT PVDQLPRIDA QLAQSQGVVA KYSALAAAAA GDDGRELDQF MTHYVLLLCS  180
FKEQLQQHVR VHAMEAVMAC WELEQNLQSL TGASPGEGTG ATMSDGEDDQ ADSEANMYDP  240
SLDGADNMGF GLPTESERSL MERVRQELKH ELKQGYKEKL IDIREEILRK RRAGKLPGDT  300
TSTLKAWWQS HAKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSTSVKT  360
KRKSNAGDNN S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-157	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G10210.3