PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G10210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 318aa MW: 34606.7 Da PI: 5.5804

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G10210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24	6.8e-08	260	293	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + ONIVA10G10210.1 260 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 293 569*****************************87 PP
2	ELK	26.8	1.2e-09	214	235	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ ONIVA10G10210.1 214 ELKHELKQGYKEKLIDIREEIL 235 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MAFHGHLPHE MTMQALGADD AAVAAAAAAG GGGEDAVAAA MGGGGEADAA RCKAEILAHP 60 LYEQLLSAHV ACLRIATPVD QLPRIDAQLA QSQGVVAKYS ALAAAAAGDD GRELDQFMTH 120 YVLLLCSFKE QLQQHVRVHA MEAVMACWEL EQNLQSLTGA SPGEGTGATM SDGEDDQADS 180 EANMYDPSLD GADNMGFGLP TESERSLMER VRQELKHELK QGYKEKLIDI REEILRKRRA 240 GKLPGDTTST LKAWWQSHAK WPYPTEEDKA RLVQETGLQL KQINNWFINQ RKRNWHSNPS 300 SSTSVKTKRK SNAGDNNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-158	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G10210.1