PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G10170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 736aa    MW: 80957.5 Da    PI: 7.812
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G10170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.41.4e-1963118257
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
         Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                      r+ + +t +q e+L+++F+++++p++++ ++LAk+l++te+q+k+WFqN R+k+kk
  ONIVA10G10170.1  63 RRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKK 118
                      6677899************************************************8 PP
2START73.55.7e-242684986201
                      HHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
            START   6 aaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                      ++++l+ k +++ p+W         es+n++e+l k  +  +     +++ + r++++v + +++lv++lld + +W e ++    +a t++ i
  ONIVA10G10170.1 268 ENESLLVKKKENGPLWLPHMdilgvESLNYQEYLAKSRTI-GqkpvdFKVVVTRDTAIVNGSCVDLVKSLLDAN-RWRELFPgivaSANTTKII 359
                      45666677789999999888899999********999553.3589999**************************.******99999******** PP

                      CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..........-TTSEE...-EESSEEEEEEEECTC CS
            START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.........sssvvR...aellpSgiliepksng 160
                      s+g      g lqlm aelq++sp vp  d++f+R++ q g g w +vdvS+d   + ++         ss  +R   ++llpSg++ie+++ng
  ONIVA10G10170.1 360 STGpsnlhdGLLQLMRAELQVMSPEVPvCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESktaqssvqtSSTAARrmeVRLLPSGCVIEEMENG 453
                      ****************************************************97666655543222333222233445999************* PP

                      EEEEEEEE-...EE--.SSXXHHHHHHHHHHHHHHHHHHHHHHTX CS
            START 161 hskvtwveh...vdlk.grlphwllrslvksglaegaktwvatlq 201
                      +skv        +++   r + +l++++ +s +  +a++  atlq
  ONIVA10G10170.1 454 YSKVLCFLIdsiTEVVmRRKVLYLVKQMTSSFTGLFASMSKATLQ 498
                      *99865432001232212233566677777777777777777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
MNGELKLMAS YVSKLKFILQ KDQQQEPHTA NLLVLLGSSN QDKRNGLSQG ENRMDTCTRK  60
KPRRYQLLTM QQKETLNRAF QSCPNPDRND LKKLAKELNM TETQIKYWFQ NCRTKMKKFK  120
NNEERKLLQK ENEELKKENA ELRNRMKNST CRACDLPLFH IDCRHWENPM LNKGNHGVTS  180
NLIPQAVSSL LPSSSGFVAS GSNLSSNAVL MPVSAMPSSV LQPAPAVSGA NFPILHNLSA  240
NANDGYTEKN VLDLANRAME EFFSLMKENE SLLVKKKENG PLWLPHMDIL GVESLNYQEY  300
LAKSRTIGQK PVDFKVVVTR DTAIVNGSCV DLVKSLLDAN RWRELFPGIV ASANTTKIIS  360
TGPSNLHDGL LQLMRAELQV MSPEVPVCDV TFLRQSVQFG SGLWCVVDVS IDTILPGESK  420
TAQSSVQTSS TAARRMEVRL LPSGCVIEEM ENGYSKVLCF LIDSITEVVM RRKVLYLVKQ  480
MTSSFTGLFA SMSKATLQDG DDTHFAHQIV GGATGEPAGL LLSATTTIWL PGVNPRRVYD  540
HLRDEQCHGE WRCLLGEQLH QGNALPYGAP LNGETVPEFY RMVNGLHEGH AISLISPREM  600
GGNISNTLLL QEARTDLSGS LIVYARTDVN TVHSIMNSGL NPATVFLVSS GCAILPDCLE  660
SFPLHPAATA DQAGTSSAAI ASRSETGGSF VTVTYQMFFS SQGGAAPASS SIHQGRDALK  720
KATDIFKVVL DTITVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16096KKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.13e-69HD-ZIP family protein