PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G08290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C3H
Protein Properties Length: 665aa    MW: 77070.8 Da    PI: 8.8142
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G08290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.61.1e-08646663926
                      GGGTS--TTTTT-SS-SS CS
          zf-CCCH   9 fartGtCkyGdrCkFaHg 26 
                      +++ G+C+yG++CkF+H+
  ONIVA10G08290.1 646 YQQQGWCPYGENCKFMHD 663
                      8999*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    
MAAPAADDDD HRAALPREED DGEEEEGSEE EVESDDEEEE EGEGYDWSEE DDPEAASLAG  60
ICDPDAGSDD DPTFDPAADG DLEVDAVLRS RMARMSLSSA RKDRKGSRMP KMGKEEMDLL  120
AMVDKLMHDG QLEKLKVYEC KAYLRMHKLR LSGNKEVLLT RIREQIEKKG APRGVKGHLC  180
GQRTNAGRII KESYGTKKQQ HTFTIEILWS RGYKPWPPLH PLLIKGRNLY KDKTMRQPWL  240
DEEERNRALQ EKHARGYVAR KTREVRIKDK ENERMRRLNR NKENKSKGQD NMNKKSSQAV  300
FPQHTVTTNT VQKRAEKIIP SLQHGESGNS SQQHLSSKQT PTEQFLHYLP PFPHPQQHNE  360
VLLQKGTSRT STTQLINHQA PSLQHAVKVE TTQQQQQQQP PKSIKPAPIQ QSSAYPQQYP  420
KHQHHNQALP RVPPSQEQRA AVSQTSAARQ DFTNHQAPPS RQHGGSENMR RQEISSRPIP  480
TPTPQQAVSY TQQQPPNHQY RNEAFWQQGG TSTSRTGFMD RQSNNWGSTD HDKPAFQPFT  540
QKAKTYQHGS NGSGHHQARV DRETHQPLRS RNKDYHWEDQ SYHHQQNHHQ NYYGHRQMSQ  600
DQYHHQQNHH QNYHGRQGIN GNQYHDRQNH NQNPQRFRPW KPCFIYQQQG WCPYGENCKF  660
MHDLR