PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G07200.5

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 1100aa MW: 126399 Da PI: 7.3715

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G07200.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	155.2	1.4e-48	969	1081	5	117
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +rwl ++ei++iL+n++++ l++e++++p+sgsl++++rk++ryfr+DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqr ONIVA10G07200.5 969 INRWLCPSEICEILKNYRSFFLATEPPNKPPSGSLFVFDRKILRYFRNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQR 1060 68**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+y +Lee+ ++i+lvhyle ONIVA10G07200.5 1061 RMYRMLEEDVKHIILVHYLEI 1081 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1100 aa Download sequence
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RISTSANFLD 960 IKQILEDAIN RWLCPSEICE ILKNYRSFFL ATEPPNKPPS GSLFVFDRKI LRYFRNDGHN 1020 WRKKKDEMTV KEDHERLKSG SIDVLECYYA HGEENENFQR RMYRMLEEDV KHIILVHYLE 1080 IKVLVVPILR PLAKQNSKAH

Sequence ? help Back to Top

Protein Sequence Length: 1100 aa Download sequence

MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD  60
LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL  120
PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ  180
LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR  240
KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ  300
AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ  360
QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ  420
VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF  480
DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR  540
RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL  600
DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH  660
LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER  720
NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI  780
AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE  840
AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH  900
PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RISTSANFLD  960
IKQILEDAIN RWLCPSEICE ILKNYRSFFL ATEPPNKPPS GSLFVFDRKI LRYFRNDGHN  1020
WRKKKDEMTV KEDHERLKSG SIDVLECYYA HGEENENFQR RMYRMLEEDV KHIILVHYLE  1080
IKVLVVPILR PLAKQNSKAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	9e-57	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G07200.5