PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G07200.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 1965aa MW: 222534 Da PI: 8.1699

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G07200.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	93.1	2.5e-29	960	1033	42	117
CG-1 42 ynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 y+ +v ++DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqrr+y +Lee+ ++i+lvhyle ONIVA10G07200.3 960 YKPMVVS--QNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI 1033 5555666..89**************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1965 aa Download sequence
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ 300 AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ 360 QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ 420 VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF 480 DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR 540 RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL 600 DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH 660 LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER 720 NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI 780 AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE 840 AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH 900 PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RYQADTGGCY 960 KPMVVSQNDG HNWRKKKDEM TVKEDHERLK SGSIDVLECY YAHGEENENF QRRMYRMLEE 1020 DVKHIILVHY LEIKFSSATG DSSATENTFQ QNDGSLAAAI GYPILKTASD ILKDSFKEAD 1080 SFTRWMGKEL AEVDYSQIQS SCIEEADSTI EASSREPLDQ FNVAPMDLQD HLFSIVSILP 1140 RWTYAGSMTK LLVLSYIPNK SRRDSGGHAC LEKLKFQRRF QQMGLSNVIL PHINLAESLS 1200 MLPVPTACSG VREFEFRPTD SQYMDAPRPL GGTNKVYFRM RLDNLLSLGP DEYRAAITNQ 1260 SSTKMIDLSK KIISLLANND EWSKVLKLVD DNELFTDNRQ DQFAVHLIKR KLHIWLLHKV 1320 RAGGKELSVL DDEGLGVIHL AAALGFDWAI RATVAAGVNI NFRDVHGWTA LHWAAFCGRK 1380 RTVVALIALG AAPGALTDPH PNYPVESTPA DLASANGHRG ISGFLAESSL TSHLQSLNLK 1440 ETNMSEISGL TGIGDITARC ASQPAIGDSL GAVLNAARMY QIFSVQSFQR KQALQYEGLL 1500 SMKSSKPGQL DPLHVAASRI QNKYRGWKGR KEFLCIRQRI VKIQAHVRGH QVRKHYQKMI 1560 WPVGIWEKII LSGRPRPTGL RGFRPTEGTA KSSSHGTSSK GITDRPTGDD YDFLLEGRKQ 1620 TEERPQKALA RMKHMAQYPE ARDHYRGMMT AVPEMQDSQI IKNEDLEELR ELGSGTFGTV 1680 YHGKWKGSDV AIKRIKKSCF TGQSSELERL ANEFWREAEI LSKLHHPNVV AFYGVVKDGP 1740 GGTLATVTEF MVNGSLRHVL QRKDKYLDRR KRLIIAMDAA FGLEYLHSKN IVHFDLKCDN 1800 LLVNLKDQSR PICKVGDFGL SKIKRNTLVS GGVRGTLPWM APELLNGSSN KVSEKVDVFS 1860 FGIVMWEILT GEEPYANMHY GAIIGGIVNN TLRPPVPVSC DPEWRRLMEQ CWAPDPSQRP 1920 AFTEIAGRLR AISPNMITPQ RRPDLGLEEG PTWFVALGKK MRKRD

Sequence ? help Back to Top

Protein Sequence Length: 1965 aa Download sequence

MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD  60
LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL  120
PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ  180
LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR  240
KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RYLIIIDDLW AASAWDLINQ  300
AFPEVIQSSR IVIITQVEDV ALTCCCYDTE YIFEMKPMND EHSTMLFLQR LFGSESDCPQ  360
QFKEISNKIV QICGGLPLAT TNLASLLASH PVILMDLCLY IRDSLSSAFR TNSSIEGTRQ  420
VLNLSYNNLP HYLKTCLLYL NMYPEGYKIC KDDVVEKWVA EGFIDQIEGR DLKKVAGSYF  480
DELIDRRFLQ PSRLNYNNEV STCTIHDEVR DLIAYKSLEE SFVLVLDCYR KDVELSDKVR  540
RLSVHFGDTK YAKIPTNIRT SEVRSLTFFG LCKCMPSLTE FKLLRVLNLQ LSGHVGDELL  600
DLSGISELFQ LRYLKIACNI RTELPSQMRG LKYLETLQMD TTLTAVPWDI IYLPCLLHLH  660
LPFDTNMMDL IGRMTHPSTL LSLEPSSSNS LPSRGIISNL NNLRDIHLTF CTPPSKYIER  720
NMEVLGSLLG RLGALEVNIS WEGLAPPPLL QKFEWLLDNC IFSRVPRWIE KLGNLRILKI  780
AVRELPKNSV DILKGLSALT ALSLSMHAIP VERIIFDNVG FSILKYFKFN CSSVLWLKFE  840
AGAMPNLRKL KLGFNVLRED LHGTTPVSIG YLPSVKEISV KIHGVGSDAE SVLTYTVSNH  900
PSNPRINEKL VDWTTYCEEG RHMVIKEKDH GFQEEQNEQE YLDKYKQADI RYQADTGGCY  960
KPMVVSQNDG HNWRKKKDEM TVKEDHERLK SGSIDVLECY YAHGEENENF QRRMYRMLEE  1020
DVKHIILVHY LEIKFSSATG DSSATENTFQ QNDGSLAAAI GYPILKTASD ILKDSFKEAD  1080
SFTRWMGKEL AEVDYSQIQS SCIEEADSTI EASSREPLDQ FNVAPMDLQD HLFSIVSILP  1140
RWTYAGSMTK LLVLSYIPNK SRRDSGGHAC LEKLKFQRRF QQMGLSNVIL PHINLAESLS  1200
MLPVPTACSG VREFEFRPTD SQYMDAPRPL GGTNKVYFRM RLDNLLSLGP DEYRAAITNQ  1260
SSTKMIDLSK KIISLLANND EWSKVLKLVD DNELFTDNRQ DQFAVHLIKR KLHIWLLHKV  1320
RAGGKELSVL DDEGLGVIHL AAALGFDWAI RATVAAGVNI NFRDVHGWTA LHWAAFCGRK  1380
RTVVALIALG AAPGALTDPH PNYPVESTPA DLASANGHRG ISGFLAESSL TSHLQSLNLK  1440
ETNMSEISGL TGIGDITARC ASQPAIGDSL GAVLNAARMY QIFSVQSFQR KQALQYEGLL  1500
SMKSSKPGQL DPLHVAASRI QNKYRGWKGR KEFLCIRQRI VKIQAHVRGH QVRKHYQKMI  1560
WPVGIWEKII LSGRPRPTGL RGFRPTEGTA KSSSHGTSSK GITDRPTGDD YDFLLEGRKQ  1620
TEERPQKALA RMKHMAQYPE ARDHYRGMMT AVPEMQDSQI IKNEDLEELR ELGSGTFGTV  1680
YHGKWKGSDV AIKRIKKSCF TGQSSELERL ANEFWREAEI LSKLHHPNVV AFYGVVKDGP  1740
GGTLATVTEF MVNGSLRHVL QRKDKYLDRR KRLIIAMDAA FGLEYLHSKN IVHFDLKCDN  1800
LLVNLKDQSR PICKVGDFGL SKIKRNTLVS GGVRGTLPWM APELLNGSSN KVSEKVDVFS  1860
FGIVMWEILT GEEPYANMHY GAIIGGIVNN TLRPPVPVSC DPEWRRLMEQ CWAPDPSQRP  1920
AFTEIAGRLR AISPNMITPQ RRPDLGLEEG PTWFVALGKK MRKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-117	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G07200.3