PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G07150.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 531aa    MW: 58884.6 Da    PI: 6.2913
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G07150.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS431.56.4e-1321615301373
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l++++++c +av+++d +l++ l+++l +++s +gdp+qRl ay++e+L arl++s+s++yk+l+++  +   sse +++++l++e++P++kf+
  ONIVA10G07150.2 161 LKQVIIACGKAVAENDVRLTELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKVPT---SSELMSYMHLLYEICPFFKFG 251
                      57899****************************************************************9...99******************* PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                      ++ aN aI ea++ge+ vHiiDf+i qG QW++L+qaLa+Rp+gpp lRiTg+++++s   +   l  +g rL k+A+++g+pfefn+ v  + 
  ONIVA10G07150.2 252 YMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAyaRGGGLDVVGMRLYKVAQSFGLPFEFNA-VPAAS 344
                      *******************************************************988899999************************.79999 PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      +++ le+L+++ gE+++Vn+++qlh+++desvs+e++rd++L++vkslsP++v++veqe+++n+ +F+ r le+l+yy+a+f+s+++ lpr+++
  ONIVA10G07150.2 345 HEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPRLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDK 438
                      ********************************************************************************************** PP

             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       r++ E+++++r+ivn++acegaer+erhe ++kW++rl++aGF+p+pls+ +++++k+ll++++s  yr+ee++g l+lgWk+r Lv+ SaW
  ONIVA10G07150.2 439 RRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSF-YRLEERDGVLYLGWKNRVLVVSSAW 530
                      *****************************************************************65.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
MDGRINSLLS TIPQDFTRGN GRFYITQNHQ DAHYASSDDG SQKIGSSPQA FEAPYCTLES  60
SSANGAHPAH SSASSHSISP ISGSPLSHHD SHSDHTYNSP PSASCVTEIT DLQIKLRELE  120
NAILGPELDI AYDSPESALQ PNIMATPENW RQLLGINTGD LKQVIIACGK AVAENDVRLT  180
ELLISELGQM VSVSGDPLQR LGAYMLEGLV ARLSSSGSKI YKSLKCKVPT SSELMSYMHL  240
LYEICPFFKF GYMSANGAIA EAIKGENFVH IIDFQIAQGS QWMTLIQALA ARPGGPPFLR  300
ITGIDDSNSA YARGGGLDVV GMRLYKVAQS FGLPFEFNAV PAASHEVYLE HLDIRVGEVI  360
VVNFAYQLHH TPDESVSTEN HRDRILRMVK SLSPRLVTLV EQESNTNTRP FFPRYLETLD  420
YYTAMFESID VALPRDDKRR MSAEQHCVAR DIVNLIACEG AERVERHEVF GKWKARLTMA  480
GFRPYPLSSV VNSTIKTLLH TYNSFYRLEE RDGVLYLGWK NRVLVVSSAW C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein