PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G07150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 390aa    MW: 43639.9 Da    PI: 6.0756
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G07150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS193.41.4e-59216379201365
             GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                      +++Vn+++qlh+++desvs+e++rd++L++vkslsP++v++veqe+++n+ +F+ r le+l+yy+a+f+s+++ lpr+++ r++ E+++++r+i
  ONIVA10G07150.1 216 VIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPRLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDI 309
                      789******************************************************************************************* PP

             GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                      vn++acegaer+erhe ++kW++rl++aGF+p+pls+ +++++k+ll++++s  yr+ee++g l+lgWk+r
  ONIVA10G07150.1 310 VNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSF-YRLEERDGVLYLGWKNR 379
                      ***************************************************65.***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MDGRINSLLS TIPQDFTSMS ARASNHAYIC SDDSQMPYYN NSVPSGGNGR FYITQNHQDA  60
HYASSDDGSQ KIGSSPQAFE APYCTLESSS ANGAHPAHSS ASSHSISPIS GSPLSHHDSH  120
SDHTYNSPPS ASCVTEITDL QIKLRELENA ILGPELDIAY DSPESALQPN IMATPENWRQ  180
LLGINTGDLK QVIIACGKAV AENDVRLTEL LISELVIVVN FAYQLHHTPD ESVSTENHRD  240
RILRMVKSLS PRLVTLVEQE SNTNTRPFFP RYLETLDYYT AMFESIDVAL PRDDKRRMSA  300
EQHCVARDIV NLIACEGAER VERHEVFGKW KARLTMAGFR PYPLSSVVNS TIKTLLHTYN  360
SFYRLEERDG VLYLGWKNRL RKCEICNMIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.12e-87GRAS family protein