PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G06410.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 680aa MW: 76455.5 Da PI: 11.7284

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G06410.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.9e-07	344	387	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++T+ +d+ l++++ +lG + Wk I r + gRt k+rw+ ++ ONIVA10G06410.2 344 PFTARDDDELLRLHYRLGDR-WKEIGRAVY-GRTSRVMKHRWRELR 387 79**************99.****9.*********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MGWNVPFATL CALSFRMSVR ALAMRPVFPR SLNSHRERIR PRACAADRWW DTCGLRGRRG 60 CQIGVGERES RGNKREVGER RRAPDHQAGA GLAPPVAVAD GSTRVGRQRG GGIYRREGGQ 120 IRAGAPTAGR RPRRHRRWRA LWRCGCLPRT QIQAAWRKKC GMGAGRKLKT HRRNQRWADK 180 AYKKSHLGNE WKKPFAGSSH AKGIVLEKIG IEAKQPNSAI CKCARVQLVK NGKKIAAFVP 240 NDGCLNFIKE NVSLSSSRLR GRDGSGGDHG DATAAAAASR EVHRPPQAAA GMDAGGGRAA 300 AAPRQGERLP PLEPGRQEHA TPLRKVVPRQ VAPPPRPRDV YHRPFTARDD DELLRLHYRL 360 GDRWKEIGRA VYGRTSRVMK HRWRELRRGG FLAAAARKEQ AALDMADDTV ETSEVEEPAD 420 QSLPSLELQR STLADTLASS FGSCSLATDH VMDPLAGSLA LGKYQFFTII NIKDVFAGTL 480 VRHPWLPSLV KENGFRRWSR VTRSMPRRSA RLCRDRWCHH LARDVYHRPF TARDDDELLR 540 LHYRLGDRWK KIGHAVYGRT SCVMNHRWRE LRRSGFLAAA ARTEQTLDMA DDTVESEMEE 600 SDQSLPTTRK SIIASGRKGS LQAGRPSACK PTTVKIADLR RRRGRPPAKI IFAGGRWLVR 660 SACENRNRPP TKKKNFRLRR

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MGWNVPFATL CALSFRMSVR ALAMRPVFPR SLNSHRERIR PRACAADRWW DTCGLRGRRG  60
CQIGVGERES RGNKREVGER RRAPDHQAGA GLAPPVAVAD GSTRVGRQRG GGIYRREGGQ  120
IRAGAPTAGR RPRRHRRWRA LWRCGCLPRT QIQAAWRKKC GMGAGRKLKT HRRNQRWADK  180
AYKKSHLGNE WKKPFAGSSH AKGIVLEKIG IEAKQPNSAI CKCARVQLVK NGKKIAAFVP  240
NDGCLNFIKE NVSLSSSRLR GRDGSGGDHG DATAAAAASR EVHRPPQAAA GMDAGGGRAA  300
AAPRQGERLP PLEPGRQEHA TPLRKVVPRQ VAPPPRPRDV YHRPFTARDD DELLRLHYRL  360
GDRWKEIGRA VYGRTSRVMK HRWRELRRGG FLAAAARKEQ AALDMADDTV ETSEVEEPAD  420
QSLPSLELQR STLADTLASS FGSCSLATDH VMDPLAGSLA LGKYQFFTII NIKDVFAGTL  480
VRHPWLPSLV KENGFRRWSR VTRSMPRRSA RLCRDRWCHH LARDVYHRPF TARDDDELLR  540
LHYRLGDRWK KIGHAVYGRT SCVMNHRWRE LRRSGFLAAA ARTEQTLDMA DDTVESEMEE  600
SDQSLPTTRK SIIASGRKGS LQAGRPSACK PTTVKIADLR RRRGRPPAKI IFAGGRWLVR  660
SACENRNRPP TKKKNFRLRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	5e-19	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G06410.2