PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G06410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 670aa MW: 75321.2 Da PI: 11.7781 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22 | 3.9e-07 | 334 | 377 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++T+ +d+ l++++ +lG + Wk I r + gRt k+rw+ ++ ONIVA10G06410.1 334 PFTARDDDELLRLHYRLGDR-WKEIGRAVY-GRTSRVMKHRWRELR 377 79****************99.********9.***********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 670 aa Download sequence |
MGWNVPFATL CALSFRMSVR ALAMRPVFPR SLNSHRERIR PRACAADRWW DTCGLRGRRG 60 CQIGVGERES RGNKREVGER RRAPDHQAGA GLAPPVAVAD GSTRVGRQRG GGIYRREGGQ 120 IRAGAPTAGR RPRRHRRWRA LWRCGCLPRT QIQAAWRKKC GMGAGRKLKT HRRNQRWADK 180 AYKKSHLGNE WKKPFAGSSH AKGIVLEKIG IEAKQPNSAI CKCARVQLVK NGKKIAAFVP 240 NDALSSSRLR GRDGSGGDHG DATAAAAASR EVHRPPQAAA GMDAGGGRAA AAPRQGERLP 300 PLEPGRQEHA TPLRKVVPRQ VAPPPRPRDV YHRPFTARDD DELLRLHYRL GDRWKEIGRA 360 VYGRTSRVMK HRWRELRRGG FLAAAARKEQ AALDMADDTV ETSEVEEPAD QSLPSLELQR 420 STLADTLASS FGSCSLATDH VMDPLAGSLA LGKYQFFTII NIKDVFAGTL VRHPWLPSLV 480 KENGFRRWSR VTRSMPRRSA RLCRDRWCHH LARDVYHRPF TARDDDELLR LHYRLGDRWK 540 KIGHAVYGRT SCVMNHRWRE LRRSGFLAAA ARTEQTLDMA DDTVESEMEE SDQSLPTTRK 600 SIIASGRKGS LQAGRPSACK PTTVKIADLR RRRGRPPAKI IFAGGRWLVR SACENRNRPP 660 TKKKNFRLRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 4e-19 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA10G06410.1 |