PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G05410.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 286aa    MW: 31930.9 Da    PI: 8.3021
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G05410.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.75.5e-1463134259
                      --SS-EEEEEEE--TT-SS-EE..........EEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprs..........YYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                       Dg+ WrKYG K++k+s fpr           YYrC+++   +C+++k v++++  dp +  +tY   H+++
  ONIVA10G05410.1  63 TDGHLWRKYGEKKIKNSSFPRRwcktvaiyrlYYRCSYRddrNCMATKVVQQENdADPPLYRVTYIHPHTCN 134
                      7*******************854555555555******99999*******9865269************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MASRHQLQTM QFTDPASRSP RPVGGGVHGQ PPPTPMSSPF SSRKPRMQEG HPTCVNLTPI  60
PHTDGHLWRK YGEKKIKNSS FPRRWCKTVA IYRLYYRCSY RDDRNCMATK VVQQENDADP  120
PLYRVTYIHP HTCNPSPPAP TPAHVFTEPP PAKAEVHHAV LFRFSSTAGG HTANNAVHRQ  180
QWQPAAATMA AGAQAQLSMT MSDDEREQPP AAIRSAPPAR RLSMFRAVVD GLRQMRSSAP  240
PTPSSSMVVD DGWDTFSSFD LDTCEFSVDD ELLCGDHMYF PDSMQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80590.17e-16WRKY family protein