PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G05260.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

E2F/DP

Protein Properties

Length: 471aa MW: 51140.4 Da PI: 4.8201

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G05260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.7	3e-26	193	258	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++lle +e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn irwkg ONIVA10G05260.1 193 RYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETL---EV--QKRRIYDITNVLEGVDLIEKTLKNMIRWKG 258 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MDGSAAIPPR PAPTPPAPAP APPQVFLRRS VLPPPPAPHH APPPPGAHVH YFRAASPIPI 60 FRAAASSRPP RPPPPSTTTA PPPPAAPAVT PARPPPQQPA VAVAAPPPAT TTATATEEVA 120 APATGNPMAN AADNEEKNER ETVQSEVAKG ETVQGPDKEC TTGAVKGIKR PRKPKGFKKG 180 DAGPSLFSPN NCRYDSSLGL LTKKFINLLE GAEDGTLDLN KAAETLEVQK RRIYDITNVL 240 EGVDLIEKTL KNMIRWKGFD MSKPKERERQ ISALKEEIES LYDEESRLDD EIMEAQEKLN 300 ALRVDEDRRK LLYVSKEDIN AIPRFQGSTL IAVNAPRGTY IEVPDPNLDM DIYKDLDNQE 360 KHYQIVFRSA MGPVDCFLIS NHQETFNADQ QMADNLDAAV TSGSSQAPQQ MDYVQASEIG 420 ESNGVREHTS EPSKRDDPVP GIVKIVPSDD IAADYWLSSD ADVSMTDTWG T

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MDGSAAIPPR PAPTPPAPAP APPQVFLRRS VLPPPPAPHH APPPPGAHVH YFRAASPIPI  60
FRAAASSRPP RPPPPSTTTA PPPPAAPAVT PARPPPQQPA VAVAAPPPAT TTATATEEVA  120
APATGNPMAN AADNEEKNER ETVQSEVAKG ETVQGPDKEC TTGAVKGIKR PRKPKGFKKG  180
DAGPSLFSPN NCRYDSSLGL LTKKFINLLE GAEDGTLDLN KAAETLEVQK RRIYDITNVL  240
EGVDLIEKTL KNMIRWKGFD MSKPKERERQ ISALKEEIES LYDEESRLDD EIMEAQEKLN  300
ALRVDEDRRK LLYVSKEDIN AIPRFQGSTL IAVNAPRGTY IEVPDPNLDM DIYKDLDNQE  360
KHYQIVFRSA MGPVDCFLIS NHQETFNADQ QMADNLDAAV TSGSSQAPQQ MDYVQASEIG  420
ESNGVREHTS EPSKRDDPVP GIVKIVPSDD IAADYWLSSD ADVSMTDTWG T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	8e-81	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G05260.1