PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G03010.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 387aa MW: 42037.9 Da PI: 10.5119

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G03010.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.1	2.7e-31	321	379	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+ ONIVA10G03010.3 321 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGDHNHN 379 69***********************988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MEGMEEANRE AVQSCHRVLT LLSSPHSQLV PNKDLAAATG EAVAKFCSVA SRLNNGNGLQ 60 GHARVRKIKK PLPIFDSNLF LESPALAVAT AAKTPNSSPI TSLQLFPRYH QMEGSSSKDP 120 VRIPAQFPKR LLLDNPAVDS DGPSRGPPLQ LIQPVSVAPP AGTPHLALPS AHLHFIQQHQ 180 SYQRFQLMQQ MKMQSEMIKR SGLGEQGGSN GGGKGVNLKF DSSNCTASSS RSFLSSLSME 240 GSIASLDGSR SSRPFQLVSG SQTSSTPELG LMQRRRCTGR EDGSGRCTTG SRCHCAKKRK 300 LRIRRSIKVP AISNKVADIP ADEFSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER 360 CVDDPSMLIV TYEGDHNHNR VLAAQPA

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MEGMEEANRE AVQSCHRVLT LLSSPHSQLV PNKDLAAATG EAVAKFCSVA SRLNNGNGLQ  60
GHARVRKIKK PLPIFDSNLF LESPALAVAT AAKTPNSSPI TSLQLFPRYH QMEGSSSKDP  120
VRIPAQFPKR LLLDNPAVDS DGPSRGPPLQ LIQPVSVAPP AGTPHLALPS AHLHFIQQHQ  180
SYQRFQLMQQ MKMQSEMIKR SGLGEQGGSN GGGKGVNLKF DSSNCTASSS RSFLSSLSME  240
GSIASLDGSR SSRPFQLVSG SQTSSTPELG LMQRRRCTGR EDGSGRCTTG SRCHCAKKRK  300
LRIRRSIKVP AISNKVADIP ADEFSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER  360
CVDDPSMLIV TYEGDHNHNR VLAAQPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	4e-63	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G03010.3